Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0271 ATGGCATTCACAGTAGAGAGGTGCGATGAGATCGAGAAGATGGCAGCGATGGTCTTCACAATGGTGGATGAGACGTCTTCTCCGTCGTCGACGGTGCCGGCACCGTTCCTGACCAAGACATATCAGCTGGTCGACGACCCTCTCACGGACCACATTGTCTCTTGGGGTTCCGATGAGTCCACTTTCGTCGTTTGGAGACCTCCTGAGTTCGCCAGAGATCTCCTGCCCAACTACTTCAAACACAACAACTTCTCCAGCTTCGTTCGCCAGCTCAATACCTATGGTTTCAAGAAGGCAGTAGCAGATAGGTGGGAATTTGCGAATGAGTATTTCAGAAAAGGAGCTAAGCATCTTCTTTGTGAAATCCACAGAAGAAAAAGCCCAAACCATCACCACCACCACCTCCATGATCACCCGCCGATGCCGCCGACACAAAATTATCAAAGTATCTTTTGGAACGACACAGAAGTTTCTCCATTATTAATCCCACCACCTTATTCTCCCACTAAAAGAGGATTATCATCATCATCAGGAACCAGTACTCATGAAGTTCTAAGAGCACTTTCAGAAGATAATCAGAGACTGAGAAGGAAGAACTCGTTGCTGTTATCAGAACTCACTCACATGAAGAGTCTCTACAATGACATTATATACTTCATTCAAAACCATGTCAAACCAGTGGATCATAATATTAATGATCATCCCTTGGAGAAAATAAGAGGCACAAATAGTGATAATGATGATCATATTCCCAAGCTGGTTGAATTGGATTCATCAGTGTCACTTGACCATTATCAGACTCGTCAAACTGATGCTAAGTTGGATAATTCATTAGCTGGTTCTGTGAAGCTATTTGGGGTCCCACTTAGTAGCAGAAAGAGGTTGCATTCAGAAGATATGGATGATGAAGAATAA 915 0.4383 MAFTVERCDEIEKMAAMVFTMVDETSSPSSTVPAPFLTKTYQLVDDPLTDHIVSWGSDESTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFKKAVADRWEFANEYFRKGAKHLLCEIHRRKSPNHHHHHLHDHPPMPPTQNYQSIFWNDTEVSPLLIPPPYSPTKRGLSSSSGTSTHEVLRALSEDNQRLRRKNSLLLSELTHMKSLYNDIIYFIQNHVKPVDHNINDHPLEKIRGTNSDNDDHIPKLVELDSSVSLDHYQTRQTDAKLDNSLAGSVKLFGVPLSSRKRLHSEDMDDEE 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0271 304 Coils Coil 185 205 - -
Lele27g0271 304 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 27 242 IPR027725 -
Lele27g0271 304 FunFam Heat stress transcription factor B-4 28 126 - -
Lele27g0271 304 PRINTS Heat shock factor (HSF) domain signature 74 86 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele27g0271 304 PRINTS Heat shock factor (HSF) domain signature 87 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele27g0271 304 PRINTS Heat shock factor (HSF) domain signature 36 59 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele27g0271 304 Pfam HSF-type DNA-binding 36 125 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele27g0271 304 SUPERFAMILY "Winged helix" DNA-binding domain 33 125 IPR036390 -
Lele27g0271 304 SMART hsfneu3 32 125 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele27g0271 304 Gene3D - 29 126 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0271 Lele-ChrLele27 2240648 2241786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0271 31 296 HSF AT1G46264 48.428 5.94e-84 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lele27g0271 HSF_DNA-bind 1.3e-31 CL0123