Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0262 ATGGCAGCTTCATGCTTGAGCCCACTCAGGTTATCAAGCACAGAAGATGACACTGTGATACTCTTTTCAACCTCTAATTCTCCTCAAGACTCCATCTCCATCAGCCCTTCTTCGTCATCTTCTTCTTCATTTTCTTTTTCTTCTTCTTCTGGTGATCAAAAACTTTCTATCACCAATCTCTCTTACACTCTTCATCCACATAAATCCATACCCTTTTCATTCTTTCACATTCCTCAAAAGCCCAGCAGGCCTCTCCATATACTCAAGTCAGTCTCTTTTGCTGCAAAAAGTTCTGAGATTGTTGCTGTTGTTGGTCCTAGTGGCACCGGGAAATCCACCCTTCTTCGTGTCATCGCGGGGCGAGTTAAAGATGAAGACTTTGATCCCGGAAGCATATCAATCAATGATCATCCAATGACTAGTCCATCTCAGTTGAGGAAGATCTGTGGGTTTGTGGCACAAGAGGATAATTTGCTTCCTCTTTTGACTGTGAAAGAAACCTTAATGTTCAGTGCCAAGTTTAGGCTTAAAGAAATGTCATCAAAGGATAGAGAAGTTAGGGTAGAGAGCTTGTTGCAAGAACTTGGGCTGGTTCATGTTGCAGATAGCTATGTTGGAGATGAAGAGAATAGAGGGATTTCTGGTGGAGAGAGAAAAAGGTTTTCTATAGGTTCTGATATGATTCATAATCCTCCAATTTTAGTACTTGATGAGCCAACTTCAGGCTTAGATAGTTCTTCAGCTCTTCGAGTTATAAAACTTCTTTCATTGATGGCTAAGTCAAAGAAAAGAAGAGTAACTCTGTCAATTCACCAACCCAGTTATATAATATTGCAGTATATTTCTAGGTTCTTGATTCTGTCTCATGGCTCAGTTGTGCATAACGGTAGCTTGAGTTCAGATTCCGATACAATTCAATGCTTTAGAGTTTGCAATGGAAATTATAAACACATTGGAAGATTATTCAAGAAATTCCACATACACCACTTGTCCCATGCAAGACGAGGAAGAAGAAGAAACTAG 1023 0.3998 MAASCLSPLRLSSTEDDTVILFSTSNSPQDSISISPSSSSSSSFSFSSSSGDQKLSITNLSYTLHPHKSIPFSFFHIPQKPSRPLHILKSVSFAAKSSEIVAVVGPSGTGKSTLLRVIAGRVKDEDFDPGSISINDHPMTSPSQLRKICGFVAQEDNLLPLLTVKETLMFSAKFRLKEMSSKDREVRVESLLQELGLVHVADSYVGDEENRGISGGERKRFSIGSDMIHNPPILVLDEPTSGLDSSSALRVIKLLSLMAKSKKRRVTLSIHQPSYIILQYISRFLILSHGSVVHNGSLSSDSDTIQCFRVCNGNYKHIGRLFKKFHIHHLSHARRGRRRN 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0262 340 Pfam ABC transporter 88 241 IPR003439 GO:0005524
Lele27g0262 340 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 297 IPR027417 -
Lele27g0262 340 SMART AAA_5 97 312 IPR003593 -
Lele27g0262 340 ProSitePatterns ABC transporters family signature. 213 227 IPR017871 GO:0005524|GO:0016887
Lele27g0262 340 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 55 314 IPR003439 GO:0005524
Lele27g0262 340 Gene3D - 55 321 IPR027417 -
Lele27g0262 340 FunFam ABC transporter G family member 23 79 311 - -
Lele27g0262 340 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 37 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0262 Lele-ChrLele27 2138715 2139737 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0262 47 339 Calmodulin-binding Proteins AT2G36910 27.907 2.60e-15 75.5