Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0261 ATGTGGTCCGGGGGTTCTAGGTCAGTCAACTTTGGCCATTCTGAGATGGGCATGGTTGGCCTTCGAGATTTATTTGTGGTGGCGCCTGCTTCTTCGTATCATAACGACGTCGTCACGCCCGATCCTCACAACGCAGCTACCATCCACGGTGTCGGCGTTATTCCACTCCTCACGGCAGCTCCTTGTCTCGACGGTGACACAAGCAACATGCTCAATCTCAGCAGTCATAATCGAAGCCGTAGCGGTGGAATTCAGTTCTGGCAGGATCATTACTTGAAGAAGCAAGGCGCCCCCGAACACAACGGTACGACTAGCTCCGGCAATCTAGCTCACAGCGGCGGCGGAGGGTTAAGCGCCTCGGCTTTGAGCTCTGGAGGTATAACGTGCCAAGACTGTGGCAATCAAGCGAAGAAAGATTGTAGTCATAGAAGGTGCAGAACGTGCTGCAAGAGCCGAGGTTTTGGTTGCCCTACTCACTTGAAGAGCACGTGGGTTCCCGCTGCTCGTCGGAGGGAACGCCAGCTTATGGCCGCCACCGCTTCAGCCGGTGGGGGTGGTGGGTTCAGTGGGGCTACATCTGTCGCCAAGAAACCTAGACTCGTCACCTCTCAGACCACAACCACCTCCCATACTTCTACTTCCAACACAACCCCTCCTCGAAGCTTCGACACTAGCTCTAGCCATCAAGGTGCGAGTTTCAAAGAGTCATTGCCAGGGCAAGTACGTGCGCCGGCGGTGTTCAAGTGCGTTCGTGTAACGGCGGTGGATGATGGGGACGACGAATATGCTTATCAAGCAGTTGTGAACATTGGTGGCCATGTGTTCAAGGGGTTTCTGTATGATCAAGGGATTGAAAATGGTGAAGGCTATCCTAATCTCTCTGAGCTGCATTTGGGCGGTGGTGGAAACGGCGGAAGCAGCGGCGGTGCTGCAAGAAATGGAGCTACTACTTCATCCCCAATGCTGGATCCTTCTGATATATACGCAGCTTCGTCAGGTGGGGCTTTCCTCGCCGGTTCAACCTATGGTAATACCATGAATTGA 1044 0.5383 MWSGGSRSVNFGHSEMGMVGLRDLFVVAPASSYHNDVVTPDPHNAATIHGVGVIPLLTAAPCLDGDTSNMLNLSSHNRSRSGGIQFWQDHYLKKQGAPEHNGTTSSGNLAHSGGGGLSASALSSGGITCQDCGNQAKKDCSHRRCRTCCKSRGFGCPTHLKSTWVPAARRRERQLMAATASAGGGGGFSGATSVAKKPRLVTSQTTTTSHTSTSNTTPPRSFDTSSSHQGASFKESLPGQVRAPAVFKCVRVTAVDDGDDEYAYQAVVNIGGHVFKGFLYDQGIENGEGYPNLSELHLGGGGNGGSSGGAARNGATTSSPMLDPSDIYAASSGGAFLAGSTYGNTMN 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0261 347 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 237 284 IPR006511 -
Lele27g0261 347 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 128 170 IPR006510 -
Lele27g0261 347 Pfam Domain of unknown function (DUF702) 126 285 - -
Lele27g0261 347 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 62 331 IPR007818 GO:0003700|GO:0006355
Lele27g0261 347 MobiDBLite consensus disorder prediction 179 237 - -
Lele27g0261 347 MobiDBLite consensus disorder prediction 196 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0261 Lele-ChrLele27 2130830 2132082 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0261 2 327 C2H2 Transcription Factor Family AT5G12330 51.603 4.83e-91 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Lele27g0261 DUF702 2.4e-62 No_clan