Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0245 ATGGCTTCTCCTTCTTCTCTAGCTTCTCTGTTCTTTCACTCCCTTCTTCTTCTCTGCCTCACTGCATCTTCTTCTACTTCTGGTTCATCACTTCCTCTGTTGTCTCTCAAAAGGCAAGCTTCAATCTTGGTCTCTCTAAGACAAGGTTTTCAACCTCAGAATTCTTCTTCTCTTGAATCATGGCATGTCTCCAACTTTCTGTCACTTTGTTCTTGGGATGGTATCAAATGTGACCGGACCAACAGGTCTGTGATTTCCTTCGACATCTCCAATTACAACTTTTCTGGGTTTCTTTCCCCTGTCATAGCCGAGCTCCGGGGACTTGTGTCTGTCTCTGTTGTCGGCAACAGCTTTTCCGGCGAGCTTCATCCAGAGATTCTCAAGCTGCCCAAGCTTCACTTCCTCAACATATCCCACAACATGTTCACTGGGAATCTGAATACTTGGGACTTCTCCGACATGAGTGAGCTTGAAGTTCTTGATGCTTACGACAACGACTTTAACGGCGAGCTTCCTCTTGGTGTCACCAATCTTCCCAAGCTCAGGCACTTGAATTTTGGCGGGAATTACTTTTATGGGAGAATCCCAGAAGAGTATGGGAAAATGGTGGGCTTGAATTTTCTCTCTCTTGCTGGGAATGATCTAAGTGGGTTTATACCCAGAGAACTTGGGAATCTCACTAATTTGACCCATTTATACTTGGGATATTTCAACAAATTTGACGGTGGAATCCCAAATGAGTTTGGGAATCTTATCAATTTGGTTCATCTTGACCTTGCAAATTGCAGCTTGAATGGTACAATTCCTTCAGAATTAGGCAAGCTTTCAAAATTAGACACACTTTTCTTGCAAACAAATCAGCTTACTGGTTCAATCCCAGCTCAGATTGGCAATTTGAGCAACTTGAGATCTCTTGATTTTTCTAACAATGAGTTAATTGGAGAAATCCCATTTGAGCTCTCAAATCTCCACGAGCTCACACTCATCAACTTGTTCATCAACAAATTGCATGGTGAGATTCCTCAGTTCATCTCTGAGCTACCAAAGCTTGAAACTTTACATCTATGGAAGAACAATTTCACTGGTTCAATCCCTCCTGGGCTTGGCCAGAATGGGAAATTAATTGAACTTGATCTTTCATCAAATAAGCTTACTGGGTTAGTTCCAAAATCTCTCTGCTTTGGGAAGAAGCTCAAGATCTTAATCTTGCTCAATAATTTTCTCTTTGGATCTTTGCCTGATGATCTTGGAGAATGCTACACCCTTCAAAGAGTTCGCTTGGGTCAGAACTATTTAACAGGGAAAACACCAAATGGGTTTCTTTATCTTCCTCAACTTTTACTTCTTGAGCTGCAGAACAACTATCTCACTGGTGTTCTTCCTCAAGATTCAGCAGCAAATTCAACATCAAAACTAGAGCAGTTGAATCTCTCAAACAATCGTCTTTCCGGGTCTCTCCCGGCATCAATTGGGAATTTCCCAAATTTGCAGAATCTTCTCCTCAGTGAAAACAGATTCTCTGGAGAAATCCCACCAGATATAGGGAAGTTGAAGAATCTGTTGAAGTTGGATATGACCAGGAACAACATATCAGGTAGTATTCCTTCAGAGATAGGGAATTGTGCTTTGCTCACTTACTTAGACTTGAGCCAGAACCAACTTTCCGGTCCTATTCCTGTTCAAATTTCCAAAATTCACATCTTAAACTACCTTAATGTCTCAAGGAACAACCTTAACCAGAGCCTCCCAAAAGAACTAGGTACCATGAAAGGGTTAACCTCAGCAGATTTATCTCACAACAACTTCTCTGGTTCAATTCCTGAAGTTGGTCTGTTCACAGTCTTGAATTCAACCTTCTTTCAAGGAAACCCAAATCTATGTGGGTATGATCTAAACCCATGTGGCACTCATTCATCATACTCACTTTCAGACTCTGATGAGAATAACAACACGAAATCCGGAGTTCCCGGGAAGTACAAGCTTCTTTTTGCACTTGCACTACTGGGATGTTCTTTCATTTTTGCAGCCTTGGCCATCATCAAAAGCCGAAAGAAGGCGAGGAGGAATTCGAATTCGTGGAAGCTCACGGCGTTTCAGAAGATAGAATATGGAAGTCCAGACATATTGGGATGCATAAAGGAGAGCAATGTGATAGGAAGAGGAGGAGCTGGGATTGTGTACAGAGGCACCATGCCAAATGGCGAGGAGCTAGCAGTGAAAAAACTCCTAGGATTCAACAAAGGCTCATCTCATCATGACAATGGCTTATCTGCAGAAATAAGAACACTGGGCAGGATAAGGCACAGGTACATTGTGAGATTACTAGCTTTCGTCTCCAACAGAGAGACGAATTTGCTCGTGTACGAGTACATGCCAAATGGGAGTTTGGGCGAAGTTCTTCACGGGAAGAGAGGCGAGATCTTGAAGTGGGAAACAAGGCTTAAGATAGCCATTGAAGCAGCAAAAGGGCTTTGTTATCTTCACCATGATTGTTCACCATTGATAATTCATAGAGATGTGAAATCTAATAACATATTGTTGAATTCTGAGTTTGAGGCTCATGTTGCTGACTTTGGACTTGCCAAGTTCTTGCAAGACACTGGCACATCAGAATGCATGTCTTCCATTGCCGGCTCTTATGGCTATATTGCTCCAGAGTATGCATACACATTGAAAGTGGACGAGAAGAGCGATGTTTATAGCTTTGGAGTGGTACTGTTAGAACTCTTGACGGGTAGAAGGCCGGTGGGCGATTTCGGAGAAGAAGGAATAGACATTGTTCAGTGGACAAAGATGCAAACCAATAACTGGAGCAAAGACAAGGTTCTGAGGATCCTTGACGTGAGGCTGCAAAATAGAATCCCTATAGATGAAGCGAAACAAGTGTTCTTTGTGGCCATGCTTTGTGTTCAAGAACACAGTGTGGAGAGACCCACCATGAGAGAAGTGGTTGAAATGCTTGTACAAGCAAAGCAGCCCAATACATTTTAA 2991 0.4246 MASPSSLASLFFHSLLLLCLTASSSTSGSSLPLLSLKRQASILVSLRQGFQPQNSSSLESWHVSNFLSLCSWDGIKCDRTNRSVISFDISNYNFSGFLSPVIAELRGLVSVSVVGNSFSGELHPEILKLPKLHFLNISHNMFTGNLNTWDFSDMSELEVLDAYDNDFNGELPLGVTNLPKLRHLNFGGNYFYGRIPEEYGKMVGLNFLSLAGNDLSGFIPRELGNLTNLTHLYLGYFNKFDGGIPNEFGNLINLVHLDLANCSLNGTIPSELGKLSKLDTLFLQTNQLTGSIPAQIGNLSNLRSLDFSNNELIGEIPFELSNLHELTLINLFINKLHGEIPQFISELPKLETLHLWKNNFTGSIPPGLGQNGKLIELDLSSNKLTGLVPKSLCFGKKLKILILLNNFLFGSLPDDLGECYTLQRVRLGQNYLTGKTPNGFLYLPQLLLLELQNNYLTGVLPQDSAANSTSKLEQLNLSNNRLSGSLPASIGNFPNLQNLLLSENRFSGEIPPDIGKLKNLLKLDMTRNNISGSIPSEIGNCALLTYLDLSQNQLSGPIPVQISKIHILNYLNVSRNNLNQSLPKELGTMKGLTSADLSHNNFSGSIPEVGLFTVLNSTFFQGNPNLCGYDLNPCGTHSSYSLSDSDENNNTKSGVPGKYKLLFALALLGCSFIFAALAIIKSRKKARRNSNSWKLTAFQKIEYGSPDILGCIKESNVIGRGGAGIVYRGTMPNGEELAVKKLLGFNKGSSHHDNGLSAEIRTLGRIRHRYIVRLLAFVSNRETNLLVYEYMPNGSLGEVLHGKRGEILKWETRLKIAIEAAKGLCYLHHDCSPLIIHRDVKSNNILLNSEFEAHVADFGLAKFLQDTGTSECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELLTGRRPVGDFGEEGIDIVQWTKMQTNNWSKDKVLRILDVRLQNRIPIDEAKQVFFVAMLCVQEHSVERPTMREVVEMLVQAKQPNTF 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0245 996 SUPERFAMILY L domain-like 396 633 - -
Lele27g0245 996 Gene3D Ribonuclease Inhibitor 345 641 IPR032675 -
Lele27g0245 996 Pfam Leucine rich repeat 348 406 IPR001611 GO:0005515
Lele27g0245 996 SMART serkin_6 712 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g0245 996 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 239 344 - -
Lele27g0245 996 ProSitePatterns Serine/Threonine protein kinases active-site signature. 835 847 IPR008271 GO:0004672|GO:0006468
Lele27g0245 996 Pfam Protein tyrosine and serine/threonine kinase 714 987 IPR001245 GO:0004672|GO:0006468
Lele27g0245 996 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 151 238 - -
Lele27g0245 996 Pfam Leucine rich repeat N-terminal domain 37 78 IPR013210 -
Lele27g0245 996 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 791 996 - -
Lele27g0245 996 SUPERFAMILY Protein kinase-like (PK-like) 708 988 IPR011009 -
Lele27g0245 996 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 681 790 - -
Lele27g0245 996 Pfam Leucine Rich Repeat 253 275 IPR001611 GO:0005515
Lele27g0245 996 Pfam Leucine Rich Repeat 301 323 IPR001611 GO:0005515
Lele27g0245 996 Pfam Leucine Rich Repeat 471 493 IPR001611 GO:0005515
Lele27g0245 996 Gene3D Transferase(Phosphotransferase) domain 1 791 995 - -
Lele27g0245 996 Gene3D Ribonuclease Inhibitor 38 147 IPR032675 -
Lele27g0245 996 PRINTS Leucine-rich repeat signature 469 482 - -
Lele27g0245 996 PRINTS Leucine-rich repeat signature 374 387 - -
Lele27g0245 996 Gene3D Phosphorylase Kinase; domain 1 707 790 - -
Lele27g0245 996 Gene3D Ribonuclease Inhibitor 238 344 IPR032675 -
Lele27g0245 996 SUPERFAMILY RNI-like 87 433 - -
Lele27g0245 996 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 205 982 - -
Lele27g0245 996 Gene3D Ribonuclease Inhibitor 148 237 IPR032675 -
Lele27g0245 996 SMART LRR_typ_2 299 323 IPR003591 -
Lele27g0245 996 SMART LRR_typ_2 251 275 IPR003591 -
Lele27g0245 996 SMART LRR_typ_2 347 371 IPR003591 -
Lele27g0245 996 SMART LRR_typ_2 565 589 IPR003591 -
Lele27g0245 996 SMART LRR_typ_2 517 541 IPR003591 -
Lele27g0245 996 SMART LRR_typ_2 202 226 IPR003591 -
Lele27g0245 996 SMART LRR_typ_2 372 394 IPR003591 -
Lele27g0245 996 SMART LRR_typ_2 469 493 IPR003591 -
Lele27g0245 996 SMART LRR_typ_2 443 466 IPR003591 -
Lele27g0245 996 ProSiteProfiles Protein kinase domain profile. 712 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g0245 996 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 351 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0245 Lele-ChrLele27 1947897 1952134 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0245 24 989 Receptor kinase-like Gene Family AT5G65700 56.774 0.0 1063
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele27g0245 PK_Tyr_Ser-Thr 2.3e-44 CL0016