Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0244 ATGCTTAGTACAATTTTCAGAAGATCTTGTTCCTTAGTCTCAAGGCGCGCTTTCGCCGCCTCCACGTTGATCCAGTATCAGCATCACCTCACCTTATCAGTCTCCGGCTATGGTGCGGTTGCCGGTAGTGAGCTTCGGCCATCCTCCTCCAACTTGTTCGGTTCCGGTGGGTTCAAGTCAAGCGCATTTCATTCACAAGCGGGGCCGTTGAATTTCCGGGCGTCTTTGGTTTCTCGTGCTGAGTATGCTGTTGATGATTACCCCTTCGAAGAAGGGCCCAAGGGAAACAATGATGACGGCCTTGATATAGCGAAGCTCGGTATTTCTCAGGATATTGTCTCTGCTTTGGCCAAGAGAGGCATATCGAAGCTCTTCCCCATACAGAGAGCTGTACTGGAACCTGCCATGCAAGGTTGTGATATGATTGGTCGAGCTAGAACAGGAACTGGGAAAACTCTTGCTTTTGGGATACCTATCATGGACAAGATCATTCAGTATAATGCTAAGCAGGGACGAGGAAGGGATCCTCTTGCTTTGGTTTTGGCTCCAACTAGAGAACTTGCTCGGCAGGTGGAAAAGGAATTCGCTGAGTCAGCACCTAATTTGGATACAATTTGTGTTTATGGGGGAACACCCATTTCCCGCCAAATGAGGCAGCTTGACTATGGTGTCGATATTGCAGTTGGCACACCTGGTCGAATTATTGATCTTCTTAATAGAGGTGCTCTAAATTTGAAGGACATTCAGTTTGTTGTTCTTGATGAAGCTGATCAGATGCTTCAAGTTGGCTTTCAGGAAGATGTTGAAAAAATCTTGGAGAGGTTGCCTCCCAAACGCCAAACTCTTATGTTCTCAGCAACAATGCCATCTTGGATAAGGCAGATTTCTCGCAATTACTTAAATGATCCATTAACCATTGATCTTGTTGGAGATTCTGATCAGAAGTTGGCAGATGGAATTACGTTATACTCAATTGCCTCAGATATGTATGGAAAAGCAGGAATTATTGAAACTCTAGTAACTGAACACGCAAAAGGAGGAAAGTGTATTGTTTTCACCCAAACGAAACGTGATGCTGATCGACTATCATATTCCATGTCAAGAAGCCTTAGGTGTGAGGCCTTGCATGGAGATATCTCACAAGCTCAGAGGGAAAGAACTCTTTCTGGCTTTAGAGAAGGCCATTTCAATGTTTTAGTAGCGACTGATGTTGCTTCACGTGGCCTTGACATACCAAATGTTGACCTTGTAATACATTTTGATCTTCCCAATAATTCAGAGATATTTGTTCATCGATCGGGACGGACGGGTCGAGCTGGGAGGAAAGGAACTGCTATCCTTATTTATTCTCAAGATCAGACCAGAGCTGTCAAGATTATTGAGCGTGATGTTGGCTGCAGATTTTCTGAGCTACCGAGAATTACTGTTGAAGGTGAATCAGTAGGCATGTTTAATAGCAAGGGTGGTGGTCGATTTAGCAATTCTGGAGGTATGCGGGATCGTAGATTTGGTGATTCAGGTTTTGGCCGTAGTTCTGGATTTGGTCGCTCCAGCTTTGGTAATTCTGATGAGAGGGGAAGGTATGGTGGACCTAATTCTGGTCGTTTTGGTGGCGTTGGATCAAGTCAACCACGGAGTGGGTTTGGGGGATCATTTGGTAATTCTTCAGGTGAAAGCTCTGGTTATGGTTCCTTTGGTGGCTTTGGCTCTAGACCATCAGACGGTGGCTTTGGCAGATCTAGCGTAGATCGGTCAGGAAGCACTGGAGGATTTGGGTTTAGTCGTCCAAGTGGTGGCACTAGATTTGGTGGTTCAGATCATCCTGGTGGTTTTGGCTCGGGTCAATCTAGTGGATTTGGTGACAGGTATTCTAACCAAAGGAATGCCTTTGGTGATTCTCAAGGTAGTAGTGGTTTTGGCAATGACCAGAATAATGATCAGAACAGTGGGAGAAGGCCCTTCTGA 1965 0.4545 MLSTIFRRSCSLVSRRAFAASTLIQYQHHLTLSVSGYGAVAGSELRPSSSNLFGSGGFKSSAFHSQAGPLNFRASLVSRAEYAVDDYPFEEGPKGNNDDGLDIAKLGISQDIVSALAKRGISKLFPIQRAVLEPAMQGCDMIGRARTGTGKTLAFGIPIMDKIIQYNAKQGRGRDPLALVLAPTRELARQVEKEFAESAPNLDTICVYGGTPISRQMRQLDYGVDIAVGTPGRIIDLLNRGALNLKDIQFVVLDEADQMLQVGFQEDVEKILERLPPKRQTLMFSATMPSWIRQISRNYLNDPLTIDLVGDSDQKLADGITLYSIASDMYGKAGIIETLVTEHAKGGKCIVFTQTKRDADRLSYSMSRSLRCEALHGDISQAQRERTLSGFREGHFNVLVATDVASRGLDIPNVDLVIHFDLPNNSEIFVHRSGRTGRAGRKGTAILIYSQDQTRAVKIIERDVGCRFSELPRITVEGESVGMFNSKGGGRFSNSGGMRDRRFGDSGFGRSSGFGRSSFGNSDERGRYGGPNSGRFGGVGSSQPRSGFGGSFGNSSGESSGYGSFGGFGSRPSDGGFGRSSVDRSGSTGGFGFSRPSGGTRFGGSDHPGGFGSGQSSGFGDRYSNQRNAFGDSQGSSGFGNDQNNDQNSGRRPF 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0244 654 MobiDBLite consensus disorder prediction 617 654 - -
Lele27g0244 654 CDD SF2_C_DEAD 342 449 - -
Lele27g0244 654 MobiDBLite consensus disorder prediction 536 563 - -
Lele27g0244 654 Gene3D - 102 310 IPR027417 -
Lele27g0244 654 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 102 484 - -
Lele27g0244 654 Pfam Helicase conserved C-terminal domain 335 440 IPR001650 -
Lele27g0244 654 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 132 306 IPR014001 -
Lele27g0244 654 SMART helicmild6 360 440 IPR001650 -
Lele27g0244 654 CDD DEADc 112 307 - -
Lele27g0244 654 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 461 IPR027417 -
Lele27g0244 654 MobiDBLite consensus disorder prediction 485 654 - -
Lele27g0244 654 SMART ultradead3 120 323 IPR014001 -
Lele27g0244 654 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 335 479 IPR001650 -
Lele27g0244 654 Gene3D - 321 481 IPR027417 -
Lele27g0244 654 FunFam ATP-dependent RNA helicase RhlE 94 309 - -
Lele27g0244 654 Pfam DEAD/DEAH box helicase 125 292 IPR011545 GO:0003676|GO:0005524
Lele27g0244 654 MobiDBLite consensus disorder prediction 580 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0244 Lele-ChrLele27 1930900 1935367 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0244 106 472 Eukaryotic Initiation Factors Gene Family AT3G19760 33.333 2.62e-67 224