Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0236 ATGAACAATAGTGTTCCCGCTTGTAATTTTCAGAGCAATAGCAAGAATCCCATGGGACCAGATCAAGAACTTGTAGAGCTCCTTTGGCAAAATGGACAGGTAGTTTTGAACAGCCAAACAACGACACATAGGAAACCAGTTTTGAATAATTCAGTAAACTCAAGGCAAGTTCAGAATAATGATCAACCAACATTGAGGACTAGTGGATCATATGGGAATTCGAGTAATTTGTTTCAAGAAGATGAGACGGTTTCATGGATTCATTACCCACTGGAAGATCCATTGGAACAAGAATTATGTTCAGAATTTTTACCTGAACTTCCATCTTGTGAGATTGAGACTGATAAGCCAAATAAGCAGTTGGAAGAAGACAAGTTCGCCAAATTCGCTACCGATAGCGTCTCTTCTCATCTGACTGCAACTTCACAATCAACTAATATGAAACTGTCCTCTGTTCAGAAATTCTCAGGAAATCCTATTCTTTCACCTAGATTTTTTCCTGATTCATCTCAGAAAAACGTTGACTTCAATGGGTGGCGAAAATTCCTCAATTTCTCTCAGTTTTCAGCAGTTCCTAAGACTTCTAATGCACAACATGGAGAAAAAGGTACTGGGAATATGTTGCAGAATGAGGCTGGAGAGGGCTCAGTGATGACAGTTGGTTCAAGTCATTGTGGAAGCAATCAAATTCCTCGAGACCAAGATGTGAGCAGGATTTCGAGCAATGGTGTTTGGACTACTAGTTTGTCAGCAGAGCCTTCTTCATTTAGGGATAATGTTCAGAGAACATTTCCAACGGGCGGCGAAAAAGGGAAATTAGAAACACATGAACCAACTGTGACTTCATCTTCCGGTGGCTCAGACAGCAGTAGTCTCGAAAAAACTTGTTCCCGCTCTACTCGTATCTGCAGCCAGAAAAGAAAAGGGACAGATTCAGAAGAGTTAGAGAAACAAAGTGAGACTGTAACATTCCAAGCTCCTGTTCTGGGTCCCTTTAATTACCAAAATCATATGCAAAATCCAGCTCTTTCCGAGCAATATGCGCGCTGCATGGGCTATCATCATCTCATGCAAAGTGCCTCTCAGCCAATGACTGCATTCAGTTATGGTTCCCAGGCAGTACAACATAGTCAAACAATGATTCCATCCAGCTGTATCAATGGACCCCTGAGTGGGGCAGTTAATACCAACGGTGCTGTCGGTGGCAGGACGGGTAAGCCGCATTAA 1227 0.423 MNNSVPACNFQSNSKNPMGPDQELVELLWQNGQVVLNSQTTTHRKPVLNNSVNSRQVQNNDQPTLRTSGSYGNSSNLFQEDETVSWIHYPLEDPLEQELCSEFLPELPSCEIETDKPNKQLEEDKFAKFATDSVSSHLTATSQSTNMKLSSVQKFSGNPILSPRFFPDSSQKNVDFNGWRKFLNFSQFSAVPKTSNAQHGEKGTGNMLQNEAGEGSVMTVGSSHCGSNQIPRDQDVSRISSNGVWTTSLSAEPSSFRDNVQRTFPTGGEKGKLETHEPTVTSSSGGSDSSSLEKTCSRSTRICSQKRKGTDSEELEKQSETVTFQAPVLGPFNYQNHMQNPALSEQYARCMGYHHLMQSASQPMTAFSYGSQAVQHSQTMIPSSCINGPLSGAVNTNGAVGGRTGKPH 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0236 408 PANTHER TRANSCRIPTION FACTOR PIF3 12 322 IPR044273 GO:0003700|GO:0006355
Lele27g0236 408 MobiDBLite consensus disorder prediction 277 299 - -
Lele27g0236 408 MobiDBLite consensus disorder prediction 217 262 - -
Lele27g0236 408 MobiDBLite consensus disorder prediction 40 74 - -
Lele27g0236 408 MobiDBLite consensus disorder prediction 217 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0236 Lele-ChrLele27 1842248 1844639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0236 18 104 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G20180 41.935 4.66e-12 65.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1878 26 22431069 22434225 Lele27g0236 27 1842248 1844639 hybridization