Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0223 ATGCTCATTCTGTTCAGATTCGTACTCCGTTTCCTCTTCCGATCGTTTTCCAGAGCCATGGGTTGCTTTTTCGGTTGCTTCAGGTTCAAAGACGATCGCCGCCTCCCTACTTCCCAGCTTGTTGCCGATCATTCCCGTTCCAAATCTGGTCAGGATGCTGTGGTATCTCGGAATCGTCTCTCTTCTTTATTTTTATCCGAAGAGAAAGAAGATTCCCCACGCCATGAGAGGTTTAAAGTAGGTTTGGGATCTCAGATGGATGACAATGCGCTCAAGGATGAGGCGAAGTTTCTTAAAGCTTGCGGTACTTTAGCTGGGACCCCTGCTGAAATCCGGAAAGCATCTGGGAAACTGAAATCTTCACCTTCTTGTAGAAAGGATCCTGAATCTGAATCTTCACGGTTTCATTCTTGGCTTCCTAATGCTCCCGTCATGAAGCTCCAGCTGGATGCTCAACCTGTTGATTCCCCAGCTCCCATAAAACCTGGGGAAGAATGGGGAAATGGCAGGGATTCTTTAGACCGCACACAAAGCAGCTGTATCTCAAATGCACAACACACCCAAAGTGACTCTGTTGATTCAACTGAAGGAAGTAGAGCAAGGAGCCTTTATTCTGTAGGTAAGACGTGTGATAATCGATCTGAAAAAAATGCAGCTTCAGTTTCTCCATGGCCAACGGTTGCAGACACTCAGAGGAAGAACAAGTCGGTACGTTTTGAATGCGATGCTGATTCTTCTTGTGGGAGTTCTTCTGAATATGGTGGAGGTCATATGAAGAAAACAGAGTCGCCAAACAATCAGAGTGCTCACAAACTATCATCTTATGCAACCCCGAGGAAACTATCTGATGAAATGCAAACACCTGGAACCGTGTACCCTGCAACATTAGAAGATTTTCCTGATGGTAAGCCTCGAGTTAGGTCCCAGTTTGTGTATTCATTTCACGGAACAAGGGAGAATGTCTCTCAGTGCAAAGTGCTTGAGGAAGAAGATTTAAACTCTGAGCAAGATTCAAGTGATCTGAAATGTTCTCACGAGCCGCCTCAAAATGCAACTCCTTCAACAGAGCAGTCAAAGCAACACTCATCTGAAAATGAATCTAAAGTGGAAGAAAGTTTATCTGCTTGGTTGAAGCCTGCATCACTGATTGAGGAAGAGAGAAGGAAGAGAATGGGGGCCGCTTACAGTCAGATTCCTCATTCTCGTAAAACTCCTGCAGATAGGCCTATCATTGGGATGGTTGCAGCTCATTGGAATGAAGAACAGGAATCAGATATACCTCCCCCAAAGTGGTGGGATGGCAATGGCATTCCAAATTCAACGAATAAATACAAGGAAGATCAGAAAGTGAGTTGGCATGCAACACCATTTGAAGAGAGGTTGGAGAAGGCATTGTCTGAGGACAGCGTTGTGTCTCAAAGGAAGAATGTATGTGGAAAGCCCATTGCTTTTGATGACAATGAAGAAAGTGATACGGCTCTATCTCAGATGCAAGCCTCAAGTCATCCGCAATCTGTTGTGACATTTTGA 1530 0.449 MLILFRFVLRFLFRSFSRAMGCFFGCFRFKDDRRLPTSQLVADHSRSKSGQDAVVSRNRLSSLFLSEEKEDSPRHERFKVGLGSQMDDNALKDEAKFLKACGTLAGTPAEIRKASGKLKSSPSCRKDPESESSRFHSWLPNAPVMKLQLDAQPVDSPAPIKPGEEWGNGRDSLDRTQSSCISNAQHTQSDSVDSTEGSRARSLYSVGKTCDNRSEKNAASVSPWPTVADTQRKNKSVRFECDADSSCGSSSEYGGGHMKKTESPNNQSAHKLSSYATPRKLSDEMQTPGTVYPATLEDFPDGKPRVRSQFVYSFHGTRENVSQCKVLEEEDLNSEQDSSDLKCSHEPPQNATPSTEQSKQHSSENESKVEESLSAWLKPASLIEEERRKRMGAAYSQIPHSRKTPADRPIIGMVAAHWNEEQESDIPPPKWWDGNGIPNSTNKYKEDQKVSWHATPFEERLEKALSEDSVVSQRKNVCGKPIAFDDNEESDTALSQMQASSHPQSVVTF 509
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0223 509 MobiDBLite consensus disorder prediction 343 360 - -
Lele27g0223 509 MobiDBLite consensus disorder prediction 489 509 - -
Lele27g0223 509 MobiDBLite consensus disorder prediction 172 232 - -
Lele27g0223 509 MobiDBLite consensus disorder prediction 113 139 - -
Lele27g0223 509 MobiDBLite consensus disorder prediction 153 287 - -
Lele27g0223 509 MobiDBLite consensus disorder prediction 420 448 - -
Lele27g0223 509 MobiDBLite consensus disorder prediction 330 373 - -
Lele27g0223 509 MobiDBLite consensus disorder prediction 481 509 - -
Lele27g0223 509 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 20 475 IPR039300 GO:0007142
Lele27g0223 509 MobiDBLite consensus disorder prediction 260 284 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele27g0223 Lele-ChrLele27 1743656 1746812 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1857 25 26333390 26336544 Lele27g0223 27 1743656 1746812 hybridization
Lele26g1893 26 22559844 22568744 Lele27g0223 27 1743656 1746812 hybridization