Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0221 ATGGAAGTGATGGGTAATCTTAAACTTAGGTCATCAGAACATGAGAGTGAAGAAGAAGAAGAAGAAGTGATGGCTCCTGGGTTTAGATTCCACCCCACAGATGAAGAACTTGTAGGGTTTTACCTTCACAGAAAAGTTCAGAAGAAGCCTCTTCGAATCGAACTCATCAAACAGATTGACATCTACAGATTCCATCCTTGGGATCTTCCAAAGAGTAATGGGGTGGAGGGGGAGAGAGAAGGATACTTTTTTTGCAGAAGAGGGAGAAAGTACAGGAACAGCAAGAGGCCTAACAGGGTGACAGTGAGTGGGTCTGGTTTCTGGAAAGCTACGGGAATTGACAAGCATATCTATGGAGAAGGAGCTCAAAACGGCGTCGTAATTGGCCTCAAGAAGTCATTAGTGTACCATCTAGGGAATGCTGGTAAAGCCTCCAAAACTGATTGGATGATGCATGAGTTTCGACTTCCTCCCAACAACAACACTACTCTGGATCATCATCATCTTCATGAAGCTGAAGTTTGGACACTCTGCAAAATATTCAAACGGACCCCATCTCAGAAGAAGTACACACAAGCAGCAATCATACCCAGCCTAGCTCATTCAACTCCTGAATCAGGAAAATTAAGATCTGACCTTATCAATGCCAACTCATGCTTCACTTTCAAAAATCCAATTATCACTCAGCAAAATGATGAAAAGAAGCAGATTAGGAATAACATTGAAGAGGTTGAACATGAAAGAAATCACTTATTTCTGGATCAGTTAGCTCAAGCTTCACCATCAATAGTATCTTACCCTAGCTTTTGGGACCCTGGTGTGATGGAAGAGAATATATTTGCTAATGGAAACTGGAATGAGCTTCAACCTATGGTTCCATTAGCTATGGATGATCCATCCAAAATTTATTATCACTGCACATAG 924 0.4156 MEVMGNLKLRSSEHESEEEEEEVMAPGFRFHPTDEELVGFYLHRKVQKKPLRIELIKQIDIYRFHPWDLPKSNGVEGEREGYFFCRRGRKYRNSKRPNRVTVSGSGFWKATGIDKHIYGEGAQNGVVIGLKKSLVYHLGNAGKASKTDWMMHEFRLPPNNNTTLDHHHLHEAEVWTLCKIFKRTPSQKKYTQAAIIPSLAHSTPESGKLRSDLINANSCFTFKNPIITQQNDEKKQIRNNIEEVEHERNHLFLDQLAQASPSIVSYPSFWDPGVMEENIFANGNWNELQPMVPLAMDDPSKIYYHCT 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0221 307 MobiDBLite consensus disorder prediction 1 24 - -
Lele27g0221 307 SUPERFAMILY NAC domain 21 182 IPR036093 GO:0003677|GO:0006355
Lele27g0221 307 Gene3D NAC domain 33 187 IPR036093 GO:0003677|GO:0006355
Lele27g0221 307 Pfam No apical meristem (NAM) protein 26 156 IPR003441 GO:0003677|GO:0006355
Lele27g0221 307 ProSiteProfiles NAC domain profile. 24 183 IPR003441 GO:0003677|GO:0006355
Lele27g0221 307 Coils Coil 227 254 - -
Lele27g0221 307 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 21 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0221 Lele-ChrLele27 1723957 1727562 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0221 7 231 NAC Transcription Factor Family AT5G39820 45.306 3.21e-62 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele27g0221 NAM 1.1e-32 No_clan