Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0213 ATGGCTATGGCCGGCGCCATTGACGCCGCTGTGGAGGTTGGACTACTTCTGAAATTGCAACTTCTCTTCTTTGATCTCCAAGATCATTTAGGTGGTGATGTTTATGTTGAAGTTCCGGATCTGAATCTTGTACTCGTCCTGAATGAAGGTAGAGCAGCAACAGCTCAGAACTGGAATAGTGTCCAGTATGAAACGAGCGTTGATATTTTGAAGTCTTTGGGTATCCCCGTGAAGTGTATTGACACAAGGGCGAAGCCTGGCACCGCGTGGTGGACTCTGCGTCCGGTGCAGATCCTTGGACAAGTCGACCTGCGACGCCTATCAACTACTCCGACCACGATGAAACGACCTTTTGCTTGTGCTAATTTAGGACATATCAGGGAGAGAAGAACATTTGCTTACGATATGGATTTGCACTTGGAAATGAAGGAGAGACAACGTTGGACAGCTGAAGAGGATGCTTTATTAGGTGCATATGTCAAACGGTATGGTCCTAGGGAATGGAATCTTGTGTCCCAACGCATGAACAAAACCCTCAACAGGGATGCCAAATCCTGCTTAGAAAGGTGGAAGAACTACCTCAAGCCCGGCATCCGAAAGGGGTCTCTTACTGAAGAAGAGAAATCTCTTGTCATCCGGCTTCAACAGATTTACGGCAACAAATGGAAGATAATTGCTGCACAAGTCCCAGGTCGCACTGCTAAGAGATTAGGTAAGTGGTGGGAAGTATTTAAAGAGAAGCAGCAGAGAGACAAAAAGGAGTTCAACAAAACAGTTGACCCAATTGATGTCTCCAAATACGATCATATACTCGAGACTTTTGCAGAAAAGCTTGTGAAAGAACGCCCTTCCCCATCCTACCTCCTGGCTTCTCCTCCATCAGCTATGCTTTCTTGTTGGTCTTCAAACTCTAAAAGCACTTTAGGTATTAGGCCACCTTCCCCTTCTGTGATACTAAGTCTCTCTCCCTCAACTTCATTTCGATGGTTACAACCTGAGAAAATGCCACAGAATGGGAATGTAAAACCTCATGAAACTATTCCAGGTTTTGGTGATAACATGCTTGTTGTATCTGAGCTGGTTGAATGCTGTAAAGAATTGGAAGAAGGGCACCGGGCATGGTCATCACATAGGACGGAAGCAGCATGGAGGTTAAGGCGGGTGGAGTTGCAGTTGGAGTCAGAGAAAGCATGTCGTATGCGGGAGAAGATGGAAGAGTTTGAAGCAAAGATTAAAGCTCTTTGGGAAGAACAGATAGCTGCTTTGGATAGAATGGAAGCCGAACACCTGGAGCAGCTAGCTGAACTAAGAAGAGATGCAGAAACCAAGGAGCAGAAATTTGCTGCAAAGCACTCAAGGCTTAGTAAGTTTCTGGAGCAGATAGGTTGCTGA 1392 0.4583 MAMAGAIDAAVEVGLLLKLQLLFFDLQDHLGGDVYVEVPDLNLVLVLNEGRAATAQNWNSVQYETSVDILKSLGIPVKCIDTRAKPGTAWWTLRPVQILGQVDLRRLSTTPTTMKRPFACANLGHIRERRTFAYDMDLHLEMKERQRWTAEEDALLGAYVKRYGPREWNLVSQRMNKTLNRDAKSCLERWKNYLKPGIRKGSLTEEEKSLVIRLQQIYGNKWKIIAAQVPGRTAKRLGKWWEVFKEKQQRDKKEFNKTVDPIDVSKYDHILETFAEKLVKERPSPSYLLASPPSAMLSCWSSNSKSTLGIRPPSPSVILSLSPSTSFRWLQPEKMPQNGNVKPHETIPGFGDNMLVVSELVECCKELEEGHRAWSSHRTEAAWRLRRVELQLESEKACRMREKMEEFEAKIKALWEEQIAALDRMEAEHLEQLAELRRDAETKEQKFAAKHSRLSKFLEQIGC 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0213 463 Coils Coil 419 446 - -
Lele27g0213 463 Gene3D - 145 199 - -
Lele27g0213 463 FunFam MYB-related transcription factor 145 199 - -
Lele27g0213 463 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 199 249 IPR017930 -
Lele27g0213 463 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 142 463 - -
Lele27g0213 463 Gene3D - 203 260 - -
Lele27g0213 463 ProSiteProfiles Myb-like domain profile. 140 194 IPR001005 -
Lele27g0213 463 CDD SANT 204 245 IPR001005 -
Lele27g0213 463 SUPERFAMILY Homeodomain-like 145 239 IPR009057 -
Lele27g0213 463 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 140 198 IPR017930 -
Lele27g0213 463 SMART sant 199 247 IPR001005 -
Lele27g0213 463 SMART sant 144 196 IPR001005 -
Lele27g0213 463 CDD SANT 147 194 IPR001005 -
Lele27g0213 463 Pfam Myb-like DNA-binding domain 148 210 - -
Lele27g0213 463 ProSiteProfiles Myb-like domain profile. 195 245 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0213 Lele-ChrLele27 1666504 1672281 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0213 142 463 MYB Transcription Factor Family AT2G37630 58.904 4.50e-134 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele27g0213 Myb_DNA-bind_6 5.4e-14 CL0123