Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0196 ATGGTAGAAGCACAGAATTCAGAGCCAACCCACATTCCCATACCCGCATTCCCCTCCAAACCCGACAATGCCTCTGTCCCCCACATCCCCACCGAAGTTCAAGACTCTCTCCGGCGCCCACCACAAAGGCGCCGCAGCAGCAGAGACCAACCCTCCACCATCGCCGCCGCCACCAGGAAGAAGACAAAGACGACGAAGACGATCTCTGATGATGGCCAGAAAGTAGAAGAAGAAGATCACGAAGAAGAAGAAGAAGATAGGGAAGAGATAGAGAAGAAGATAGAAGCGTTACAGAGGATAGTTCCAGGTGGTGAATCCTTAGGAATGGATAAGCTGTTCGATGAAACTGCAGGTTATATAATGGCATTACAGTACCAAATCAAAGGTTTGAGAGCTCTCTCGAGCTTATTCGAGAGGTTAGAGAAAGACAAGTCCAAACTTGGAGGTTGA 450 0.4911 MVEAQNSEPTHIPIPAFPSKPDNASVPHIPTEVQDSLRRPPQRRRSSRDQPSTIAAATRKKTKTTKTISDDGQKVEEEDHEEEEEDREEIEKKIEALQRIVPGGESLGMDKLFDETAGYIMALQYQIKGLRALSSLFERLEKDKSKLGG 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0196 149 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 42 137 IPR044660 GO:0006355
Lele27g0196 149 MobiDBLite consensus disorder prediction 47 62 - -
Lele27g0196 149 MobiDBLite consensus disorder prediction 75 89 - -
Lele27g0196 149 Coils Coil 73 100 - -
Lele27g0196 149 CDD bHLH_AtIBH1_like 92 133 IPR044549 GO:0006355
Lele27g0196 149 MobiDBLite consensus disorder prediction 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0196 Lele-ChrLele27 1489502 1489951 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0196 87 133 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 42.553 2.27e-06 44.3