Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0185 ATGGCCATGCAGATTTCTTCTCGCTTTTCACCCTCTTCTGATGCTTCGGTTCTCTTCTTGATCCCAAATCCTAGCGGAATTATTTTGGAGGTGGGTGGTTGCTATATGACTGAATTTGTTTGCTTTCTTACAAGTGGCACAGTTATACTGATGGAAGTAGAAGAGGTGGACCTTTATGCAACTAATCCAGGACCAATTGATGGTTCAGTTTTATACGATCAAGATAAGCATGTATCTACGGCAGTTTGGGAAGGGCAGGAGCGTGGTGCTCTCAGATGCCATGAACACACTTCAAAGCTTGATCAATGGACACTTACTCCTAAGCAGATTGAGATGGTACACAAGGCTGGTTTTGGTTACTTTTACCTGAATACTGGCCGGCCAAAGCTTAACCTGGATCCTACGCGTGATCAATTTCCATTTGTGCTAAGATGGAAAGGAAAACAAAGTGGTCCAACAGCAAATCGCGATGTAATTTTCTACCGGAAGGCTTTGGATTCCCTAAAACCAAGTGATGTGGAGTGGCTGCCGTACAGAAGCATGGACAGTACGGTCATTCCAGAAGATATCAAAACTACTTTAATTCTTGGGAGGTCGAAGACGATGTTGATATGCTTTGACAAGGCAGAGAGACATCTTCCGAATCGATGCCTAAGGCAATATGGCATGCTTCAATCAATTCCAGAGCATGTGGAGCACTGGGAGAGGAAGAGTCGAGGAGTTGACGGCGGCGTCAATTTGTCGGGGAAAATGGAATCGGAGCTTACTGAATGGATGGACCGGAATCTCCATATTGTCAATGGCCTATTTCTCTCTCATCTGAGTTTCAAAGAACAATTTGTGGGAAGGCCTATTTCTCTCTCATCTGAGTTTCAAAGAACAAATGCTGGTTTGAGGGATATCGCGCATATAGCGGACACTTTTGCAACTGAGGGGCTGGATGCAGATCAAATTGAATCAATTTCTAGGATAAGATTGATTGCACATGAATGTTTGAGAGACCAATTTGGTGGTCCAGCCATAGTGCCAGCCACCCCACAAGTTGAGCTCGGAAAGAGGTTGAGAGGAAAGGAGAGGGTCAGAAGAAAAGGTAGTGGTAAACGAATGCGGAGGGATGACGACGACACAATTCAGTATAATGCGGCTAGTGAGGAAGAGAAACCTCAGTTCTACGGTGCTGCTATGAAGATCGAGGAATTACAACTAAGTCATGTCGACAGGGAGGTGGCGGATGAAGCACAAATCTACGGTTTAGATAATGAGTTCAATTCCGCCCTGTTAATTCATACAGATGGTGACAGTGGTGGTGAGAATCTGCAGCTATGTGATGCAAACTTTGAGCTGGATCAATCGGCTTTAGGCTCTACACCTGGTGAAGAAAATAACGAGGAGCCAAAGCATGTAGCTCCTGAGGTTAACTATGAAGAACCAAAGGATTTAGCTTCTGAGCATAACAATGAAGAAGCAAGCCATCTAACTACCGAGGTTAACAATGAAGAACTGAAGCATGCGGCTGATGCAGTTATCAAGGAAGAACTGAACCAAGTGGTCGGCGAAGAAAACGTCGAGGAAATGGATGTTGCTAACAAGGTTCATGATGCACAACAACCTTCTGATGTCTCTAAGGAAGTTGATGATAATTCACAGCTCTGTGATGCAAGTCATGAGATCAAGAACTCAATTCATGAGGCCAATAACTCAGATCATGTGACTTGA 1716 0.4435 MAMQISSRFSPSSDASVLFLIPNPSGIILEVGGCYMTEFVCFLTSGTVILMEVEEVDLYATNPGPIDGSVLYDQDKHVSTAVWEGQERGALRCHEHTSKLDQWTLTPKQIEMVHKAGFGYFYLNTGRPKLNLDPTRDQFPFVLRWKGKQSGPTANRDVIFYRKALDSLKPSDVEWLPYRSMDSTVIPEDIKTTLILGRSKTMLICFDKAERHLPNRCLRQYGMLQSIPEHVEHWERKSRGVDGGVNLSGKMESELTEWMDRNLHIVNGLFLSHLSFKEQFVGRPISLSSEFQRTNAGLRDIAHIADTFATEGLDADQIESISRIRLIAHECLRDQFGGPAIVPATPQVELGKRLRGKERVRRKGSGKRMRRDDDDTIQYNAASEEEKPQFYGAAMKIEELQLSHVDREVADEAQIYGLDNEFNSALLIHTDGDSGGENLQLCDANFELDQSALGSTPGEENNEEPKHVAPEVNYEEPKDLASEHNNEEASHLTTEVNNEELKHAADAVIKEELNQVVGEENVEEMDVANKVHDAQQPSDVSKEVDDNSQLCDASHEIKNSIHEANNSDHVT 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0185 571 Pfam Plant mobile domain 120 279 IPR019557 -
Lele27g0185 571 MobiDBLite consensus disorder prediction 524 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0185 Lele-ChrLele27 1395623 1400001 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g0185 27 1395623 1400001 Lele01g0117 01 687834 694262 CCT
Lele27g0185 27 1395623 1400001 Lele02g0114 02 673198 675932 CCT
Lele27g0185 27 1395623 1400001 Lele03g0117 03 659997 664027 CCT
Lele27g0185 27 1395623 1400001 Lele04g0114 04 675137 677872 CCT
Lele25g1895 25 26686939 26705922 Lele27g0185 27 1395623 1400001 hybridization
Lele26g1933 26 22887406 22892519 Lele27g0185 27 1395623 1400001 hybridization