Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0178 ATGAATTCTTGGGATAGGGATAATTGGAATCCATGTGTATTACCTGAATACAGGGTGAAGTTGCTGAAAGCTCTTCCATTGAAGATTTGGGCAACGATGTTAACATGCATCATGGCATCCATTCAAGTTGCAGTAATAGGGCTATGTATAGATAGTATTGGAGATGGGGATAATAGTGCATTCACTGACCATAGGAATGTCTTTGGGAGCATCTCGGAGTGCCCTAGTCATAAAGCCTCTTGTCCCTGCTTTGAATTTTCATCAATTCTTCGAGAGCATGGGACTTGGAAGTTGTATCACTCAGACTTCACTGGCTCACCATCTCCGGACTGTCGCCCCGGCGACGAGGGTGAGCTTTCCGATAGCAGTGATGTAAGGACTGAAATTGGCGACGATATGCATGAAGAGCTGCTTCTAGAAGAATCCAGAGAGCGACTAATCTGCAACCCGAGCGATGCTTCGACGATTCAGGAACGTCCAAAGATGGTATTAGAGTTGGGGATAATAGTGCATTCAGGGATCATAGGGATTTCTTTAGGAGCATCTGAGAGTCCCCAGACTATGAAGCCTCTGGTGGCTGCTTTAACTTTTCATCAATCATTTGAGGGCATGGGCCTTGGAAGTTGTATCACTCAGGTACGCCGAATTCAAGAACAAAACTATAGCAATGATGGGATTGTTCTTTGCTCCGACAACTCCAATGGGAATAGCAATTGCCTTGTATACGACATCGTTTCTGCTCGGTGTTTCTTCTTTTCCTTTGCGTTCCGACATCGATTGGCATTCGTACTCCCAATTTTCTCGGCCATTCTCTCCATTCGTTCCGGTGGTAGCACGCCGTCTTCCGATCGCCGTCCTCCGATCGCCGTCCTCCACAAGTCATCGTCCTCCACTCCACCGTTCTTCGTCCGTATTGGTCGTCGGCACTACGTGAGAGAGATTGACAGATTTGAGAGAGAAGAGAAAGGGCAGAGACGCGAGAGAACTCCGAAAGTTGTTTGTTGATTGGCAATGGGAAAGAATGAGTTTCTCACACCAAAGGCAATTGCTAACCGCATCAAAGCAAAGGGGCTGCAGAAGCTTCGGTGGTACTGCCAGATGTGTCAGAAACAATGTCGAGATGAGAATGGGTTCAAGTGTCATTGCATGAGTGAAAGTCACCAGCGTCAAATGCAAATCTTTGGACAAAACCCAACTCGGATAGTTGAGGGTTACTCTGAAGAGTTTGAGAACACCTTTCTCGAGCACATGAAGCGCAGCCACAGATTCAGTCGTATAGCAGCTACAGTAGTTTACAATGAATACATTAGTGATAGGAATCACGTTCATATGAATTCCACACGATGGCTTACACTAACTGAGTTTGTCAAGTATTTGGGTCGGACTGGAAAGTGTAAGGTTGAAGAAACACCCAAGGGTTGGTTTATCACCTATATTGATAGAGATTCTGAGACTCTTTTCAAAGAGAGGATGAAGAATAAGAGAATAAAGTCTGACATGGCAGAGGAAGAGAAGCAAGAGAAGGAGATACAGAAACAGATAGAAAAAGCTGAGCAGTTGATGCAGCCCTCTGCTAGTGGATCTGATCAACCTTCACAGGCTGAACTTCCTAGAGAATTAAAAGTGGAAGATGGAGTTAAGATTGGGTTTTCTCTTGGTTCATCAGCAAAACCTGTAACTAAGGAAAAAAGGGAGGGACCAAAGGTACTGTTCGACGAGGTCGAGGATGCCAAAAATGATGAAAGGAACCCTCGAGGCTCTTTGAAGAGGAAAGAAAGTGGTGGTGGAAAATCAACATTGGACGAACTGATGCGGGAAGAAGAGAAGAAAAGGGAGAAGATTAATAGAAAGGATTACTGGCTGCACCAGGGAATTGTTGTTAAGGTCATGAGCAAAGATTTGGCTAATAAAGGGTATTACAAGCAAAAAGGTGTTATTTTGAAGGTGATTGAGAAATATGTTGGGGAAATACAAATGCTTGAAAGCAAGCATGTGCTCAGAGTTGATCAGGCAGAGCTTGAAACTGTGATCCCTCAAATTGGTGGTCTTGTCAAAATTGTAAATGGAGCCTATCGCGGATCTACGGCAAGATTGTTAGGGGTTGATACAGATCACTTTTGTGCCAAGGTGCAGATAGAGAAAGGTGCTTATGATGGCAGAGTCCTCAAGGCAGTAGAATACGAGGATATTTGCAAAATTTCTTAG 2205 0.4444 MNSWDRDNWNPCVLPEYRVKLLKALPLKIWATMLTCIMASIQVAVIGLCIDSIGDGDNSAFTDHRNVFGSISECPSHKASCPCFEFSSILREHGTWKLYHSDFTGSPSPDCRPGDEGELSDSSDVRTEIGDDMHEELLLEESRERLICNPSDASTIQERPKMVLELGIIVHSGIIGISLGASESPQTMKPLVAALTFHQSFEGMGLGSCITQVRRIQEQNYSNDGIVLCSDNSNGNSNCLVYDIVSARCFFFSFAFRHRLAFVLPIFSAILSIRSGGSTPSSDRRPPIAVLHKSSSSTPPFFVRIGRRHYVREIDRFEREEKGQRRERTPKVVCXLAMGKNEFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSESHQRQMQIFGQNPTRIVEGYSEEFENTFLEHMKRSHRFSRIAATVVYNEYISDRNHVHMNSTRWLTLTEFVKYLGRTGKCKVEETPKGWFITYIDRDSETLFKERMKNKRIKSDMAEEEKQEKEIQKQIEKAEQLMQPSASGSDQPSQAELPRELKVEDGVKIGFSLGSSAKPVTKEKREGPKVLFDEVEDAKNDERNPRGSLKRKESGGGKSTLDELMREEEKKREKINRKDYWLHQGIVVKVMSKDLANKGYYKQKGVILKVIEKYVGEIQMLESKHVLRVDQAELETVIPQIGGLVKIVNGAYRGSTARLLGVDTDHFCAKVQIEKGAYDGRVLKAVEYEDICKIS 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0178 734 CDD KOW_KIN17 680 733 IPR041995 -
Lele27g0178 734 Gene3D - 678 734 IPR014722 -
Lele27g0178 734 Pfam KN17 SH3-like C-terminal domain 616 669 IPR041330 -
Lele27g0178 734 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 338 733 IPR037321 -
Lele27g0178 734 Coils Coil 597 617 - -
Lele27g0178 734 MobiDBLite consensus disorder prediction 497 540 - -
Lele27g0178 734 Pfam Domain of Kin17 curved DNA-binding protein 389 514 IPR019447 -
Lele27g0178 734 FunFam DNA/RNA-binding protein kin17-like 624 677 - -
Lele27g0178 734 MobiDBLite consensus disorder prediction 517 533 - -
Lele27g0178 734 Gene3D - 397 497 IPR038254 -
Lele27g0178 734 Coils Coil 491 520 - -
Lele27g0178 734 MobiDBLite consensus disorder prediction 497 515 - -
Lele27g0178 734 Pfam ZIP Zinc transporter 155 212 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lele27g0178 734 Gene3D - 624 677 - -
Lele27g0178 734 MobiDBLite consensus disorder prediction 558 605 - -
Lele27g0178 734 SUPERFAMILY beta-beta-alpha zinc fingers 363 403 IPR036236 -
Lele27g0178 734 FunFam DNA/RNA-binding protein KIN17, putative 678 734 - -
Lele27g0178 734 FunFam DNA/RNA-binding protein KIN17, putative 398 497 - -
Lele27g0178 734 SMART Kin17_mid_2 389 515 IPR019447 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0178 Lele-ChrLele27 1336318 1344793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0178 338 734 C2H2 Transcription Factor Family AT1G55460 71.154 0.0 585