Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0177 ATGATGACGAGAAGCTCTAAAGCCTTCATCTTCTTCATCTTCCTCCTTCTGGTGGTGCTTCCAGCTTTTGTGGTTTCAGAGTGTACATGTGAAGATGAGGAAGAAGATCGTGACAAACACAAGGCTATGAGGTACAAAATAGCAGCCATAGCTGCTATTCTGGTTGCGGGTGCCATCGGAGTTCTGATTCCGGTGATCGGGAAGTTTGTGCCTTCTTTCAGTCCCGACAGAGACATCTTCTTCGTGATCAAGGCCTTCGCTGCCGGAGTTATATTAGCCACCGGATTCATTCACGTCCTTCCCGATGCGTTCGAGAGCTTGACGTCCCCTTGCCTGAGCGATCATCCATGGGGAGACTTTCCCTTCACTGGTTTTGTGGCTATGTGTACGGCCATGGGAACGCTAATGGTGGACGCTTTCGCCACCGTGTATTTCAAGAAACGTCATATGAACAATGGCCAGATGGAGGCGAATAATAAAGGAGACGAAGAGAAAAACTCAGGACATGAAGATCATGTTCATCTTCACACTCATGCCACACATGGTCATGCTCATGGATCATCTGATTCTGGTTCATCTCAGCTCCTTCGTCACAGAGTCATATCACAGGTATTGGAGGTGGGGATAATAGTGCACTCAGTGATAATAGGGATATCTTTGGGAGCATCTGAGAGTCCTAAAACTATAAGGCCTTTGGTCGCTGCTTTGACTTTTCATCAATTTTTTGAAGGCATGGGACTTGGAAGTTGTATCACTCAGGCCAAATTCAAGAATAGAACTATTGCAGTGATGGGATTGTTCTTTGCTCTGACAACTCCAGTGGGAATAGCGATTGGAATAGGAATTACAAATGTGTACGATGAGAATAGTCAGACTGCTTTGATCGTTGAAGGAATATTCAATGCAGCTTCAGCAGGAATCTTAATTTATATGGCACTTGTTGATCTTCTAGCTGCAGATTTTATGACTGAGAGAATGCAAAATAAGACTCGTCTTCAAATTGGAGCAAATATTTCTCTACTTCTAGGTTCTGGTTTTATGTCTCTTCTAGCTAAATGGGCTTGA 1065 0.4423 MMTRSSKAFIFFIFLLLVVLPAFVVSECTCEDEEEDRDKHKAMRYKIAAIAAILVAGAIGVLIPVIGKFVPSFSPDRDIFFVIKAFAAGVILATGFIHVLPDAFESLTSPCLSDHPWGDFPFTGFVAMCTAMGTLMVDAFATVYFKKRHMNNGQMEANNKGDEEKNSGHEDHVHLHTHATHGHAHGSSDSGSSQLLRHRVISQVLEVGIIVHSVIIGISLGASESPKTIRPLVAALTFHQFFEGMGLGSCITQAKFKNRTIAVMGLFFALTTPVGIAIGIGITNVYDENSQTALIVEGIFNAASAGILIYMALVDLLAADFMTERMQNKTRLQIGANISLLLGSGFMSLLAKWA 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0177 354 TIGRFAM zip: ZIP zinc/iron transport family 28 354 IPR004698 GO:0005385|GO:0016020|GO:0071577
Lele27g0177 354 Pfam ZIP Zinc transporter 45 351 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lele27g0177 354 PANTHER ZINC/IRON TRANSPORTER 42 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0177 Lele-ChrLele27 1331743 1333435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0177 26 354 Inorganic Solute Cotransporters AT3G12750 56.886 6.10e-136 389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1905 25 26770078 26771752 Lele27g0177 27 1331743 1333435 hybridization
Lele26g1944 26 22974079 22975938 Lele27g0177 27 1331743 1333435 hybridization