Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0167 ATGGCTTCTTCTTCTTCTTCCTCTCATTCTTCAAAGAAATACGATGTCTTCATCAGCTTCAGAGGCGAAGATACACGCGAAAGTTTCACCAGCCATCTTCACGCCGCTCTCTGTAGAAGCAAGATCGACACCTACGTCGATTACAGACTTGAGAAAGGAAGCGAGGTTTGGCCATCACTTGTCCAAGCCATTGATGATTCCATCCTATTTCTGGTCGTTTTTTCTGAGAACTATGCTTCTTCCACTTGGTGCTTGAATGAGCTCGCCAAAATTATGCTCGATTGCTCAAAGAATCATGAGAACCGTGTTCTTCCAGTTTTCTACAGGGTGAACCCTTCACATGTACGGAAACAAAATCATAGTTACGGCGAAGCATTTATAAAACACGAGCAAGGAAATCACAATCAGCAAGTGCAAAAATGGAGGAATAGTCTCACTCAAGCTGCTAATTTATCTGGATGGGATTCTAGTAACTACAGGAATGAAGCTGAACTGATTGTAGAAATTGTCAAATGCATCTTAAAGAAGTTGGAGCGTATTCATCGAATTTATCCTTTTCATGGTCTTGTTGGAATTCATGAACGAATTGTACCCTTAGAATTATATTTGAGCAAGGAGTCAAAAGATGTTCGATTTATTGGAATCTGGGGCATGGCTGGAATTGGCAAGACAACTATTGCAGCTGCAGTATTTAACAAACATTGCTGTGATTATGAAGGGTTTTGCTTCATGGCCAATGGAACTGAGTCCATTAAAGGCATAGCTTTGGATATGTCAAAGATTGAGAATCTTCCCTTGAGTTCTGAAGTCTTTGCCAGAATGCGCAAGCTTAAATTTCTTATATTTTATAATTTTGGTTCAGAAGAGTTCAGATTGTATCTTCCTCAAGACCTTAACTCTTTACCAAATGAACTCAGGCTTCTTCATTGGGATAACTTCCCTTTGAAGTCCTTACCATCGACATTCTCCGCGGAGAAACTCGTTTCATTTGAAATGCGAAATAGCCAAGTCAGGATCCTTTGGCATGGAAAGCAAAATCTTGTGAACTTGAGGAAAATTGACCTCACTGATTCCTATAATCTAATTGAGCTCCCAGATTTTTCAAAGGCTTTAAATCTTAAAGAAGTATATCTTCGAAACTGTACAAGCTTGCGTGACCTTCACCCATCTATTTTATCGCTGCATAAGCTTGAGATTCTACGATTGGATTGGTGCGAGTCCCTTACTAGCCTTAGATGTGACACCCCTCTAAGATCCCTTCGTGATCTTACCCTCTATGACTGCTCAAGATTGAAGGTATTTTCAGTCACCTCAGAGAATATGAAGCATTTGAATCTAGCAGGAACTGCAGTGAATGAATTGCCATCATCTATTACAAGTCAAGGAAAACTTGAAACGTTCTCTCTTATTGATGGTAGAAGTCTTGATACTCCAAGCAACTCAGGGGATCTGCTATCTCTTGGCAAGTTACATACTGGAGATAATAATTGCATGCACCTTGATGCTTCAAATCTGCGTTTTTTACACGATGGCTTAAGATCTTTGGAAGCCATGCCTCATGAGACTAGCATGTTTTCTTCATTAGAAATGTTATTAGTTGTTGGAACTGAACTTAGAAGCCTGCCTGTAAGCATCAAGCACCTTCCGAGGCTTCGACATCTTCGCTTTGATTCATGCAAAAGGCTTCAGTCTCTGCCGGATCTTCCTTCTTCATTAGAACAATTAATAGGTATTGACTGCCCATCACTTGAGACTCTTCACTTCTCTTCAGCAACTAGTCAACTAGTGAAGGCAAACAAGATAAGCTTTGACTTCCAAAACTGTGCCAAGTTGGATGAACATTCATTCAAACTAATTGGATCTAATGTTATGGCTGAGATAATCAAATCTGTTCCAACCATAGAAAAATGCAGTTTCTCGAATGGTAAGGTTGAAGTTACATACCGAGGAAGCAGAGTTCCAGAGTGGTTCCCGCATAGGAAAACACAAGCTCCTCCCATTACTATTGATCTCTCTTCTGCTCTGCATTGTTCTGAGAATTGGGGTTTCATCTTTTGCGTCATTGTTCCTGAGTCTCCATCGATTGAATGGATTCGAGTTGAATGCGAAGCGTGCTTGGAAATTAGTTATGGTGAATGGGAAGAGACACACGAGTACTATTCACTCTCTGCTAGGCATGTCAACTTCACATCGGATCATGTTTTTCTTTGCTATGATGAAAGCTTTTGTTCTGAAATACACGAGACACTCAAAGAAAGTGTGGCAGATGATGCTGAGAGCAACACTCGTAAACCGAAGGTCTCGTTTAATGTTTGGGTTCATTATGGTTGTGGGGACGTTCATAAGAGGCAACAGGGATGCTTGGATATCAAAGAGTGTGGGGTGTGCCCAACATATACATCAGAATATCGCAGCTTCATTGAAAAATTGGACTTGCAATTGAAGTCAAAAACTGAGGCAATTGAAATGGGACATGGAAGCTCTTATCAGAACGAACAGAAACCTGAGGAATTTGTCTTTCCTTCTCTTCCACGTCGAACCTGGAAGCATGAAAGAAAGGGGTTGGGAGACATCCTCTTCCTATGA 2586 0.408 MASSSSSSHSSKKYDVFISFRGEDTRESFTSHLHAALCRSKIDTYVDYRLEKGSEVWPSLVQAIDDSILFLVVFSENYASSTWCLNELAKIMLDCSKNHENRVLPVFYRVNPSHVRKQNHSYGEAFIKHEQGNHNQQVQKWRNSLTQAANLSGWDSSNYRNEAELIVEIVKCILKKLERIHRIYPFHGLVGIHERIVPLELYLSKESKDVRFIGIWGMAGIGKTTIAAAVFNKHCCDYEGFCFMANGTESIKGIALDMSKIENLPLSSEVFARMRKLKFLIFYNFGSEEFRLYLPQDLNSLPNELRLLHWDNFPLKSLPSTFSAEKLVSFEMRNSQVRILWHGKQNLVNLRKIDLTDSYNLIELPDFSKALNLKEVYLRNCTSLRDLHPSILSLHKLEILRLDWCESLTSLRCDTPLRSLRDLTLYDCSRLKVFSVTSENMKHLNLAGTAVNELPSSITSQGKLETFSLIDGRSLDTPSNSGDLLSLGKLHTGDNNCMHLDASNLRFLHDGLRSLEAMPHETSMFSSLEMLLVVGTELRSLPVSIKHLPRLRHLRFDSCKRLQSLPDLPSSLEQLIGIDCPSLETLHFSSATSQLVKANKISFDFQNCAKLDEHSFKLIGSNVMAEIIKSVPTIEKCSFSNGKVEVTYRGSRVPEWFPHRKTQAPPITIDLSSALHCSENWGFIFCVIVPESPSIEWIRVECEACLEISYGEWEETHEYYSLSARHVNFTSDHVFLCYDESFCSEIHETLKESVADDAESNTRKPKVSFNVWVHYGCGDVHKRQQGCLDIKECGVCPTYTSEYRSFIEKLDLQLKSKTEAIEMGHGSSYQNEQKPEEFVFPSLPRRTWKHERKGLGDILFL 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0167 861 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 154 IPR035897 -
Lele27g0167 861 ProSiteProfiles TIR domain profile. 12 177 IPR000157 GO:0007165
Lele27g0167 861 Gene3D - 10 184 IPR035897 -
Lele27g0167 861 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 270 IPR027417 -
Lele27g0167 861 FunFam Disease resistance protein RPS4 248 439 - -
Lele27g0167 861 Pfam TIR domain 13 182 IPR000157 GO:0007165
Lele27g0167 861 Gene3D Ribonuclease Inhibitor 315 513 IPR032675 -
Lele27g0167 861 Gene3D - 185 278 IPR027417 -
Lele27g0167 861 Pfam C-JID domain 649 802 IPR045344 -
Lele27g0167 861 SUPERFAMILY L domain-like 255 588 - -
Lele27g0167 861 PRINTS Disease resistance protein signature 546 562 - -
Lele27g0167 861 PRINTS Disease resistance protein signature 212 227 - -
Lele27g0167 861 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 252 434 IPR044974 GO:0006952
Lele27g0167 861 SMART till_3 13 151 IPR000157 GO:0007165
Lele27g0167 861 Gene3D Ribonuclease Inhibitor 514 638 IPR032675 -
Lele27g0167 861 Pfam NB-ARC domain 204 234 IPR002182 GO:0043531
Lele27g0167 861 FunFam Disease resistance protein (TIR-NBS-LRR class) 10 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0167 Lele-ChrLele27 1269299 1273126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0167 237 561 WRKY Transcription Factor Family AT4G12020 34.925 3.34e-35 143