Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0165 ATGTTGCCTGGCCAAGAAACTTCAATCTCTCTCGTTAGCGTGATAGAAGAGAACCTAACGCAGCTGAAGATGCTCGATGATGTTCTTTTCTCTCCTATTTGCAGTGAGAAATACTATGCCGATGTCCTTGCTTCTGGCGAACTAACAAAACTAGCTTATTACAGTGATGCTTGTGTTGGTACAATTACATGCCGACGTGAGAAGAAGAAAGATGGTGCAGTTAGGCTCTATATCATGACCATAGGTGTTTTAGCACCTTATCGCCGCATTGGTATTGGAACAAGGCTGATGAACCATGCTCTTGATTTGTGCTCCAAGGAGAACATGTGTGAGGTTTACTTGCATGTGCGCACTGACAATGAAGATGCCATAAACTTTTATAAGAAATTTGGGTTTGAAACGACGGAAAGGATCCCAAACTATCATAGGAACGCCATTGTTATTAGAGATTGCTACGTTATAACCAAGCGTTTGGCTAGAAGGGAAGGTTGCAAACATATATGA 504 0.4187 MLPGQETSISLVSVIEENLTQLKMLDDVLFSPICSEKYYADVLASGELTKLAYYSDACVGTITCRREKKKDGAVRLYIMTIGVLAPYRRIGIGTRLMNHALDLCSKENMCEVYLHVRTDNEDAINFYKKFGFETTERIPNYHRNAIVIRDCYVITKRLARREGCKHI 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0165 167 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 159 IPR000182 GO:0016747
Lele27g0165 167 FunFam Putative n-alpha-acetyltransferase 50 6 159 - -
Lele27g0165 167 Gene3D - 5 159 - -
Lele27g0165 167 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 31 158 IPR016181 -
Lele27g0165 167 PANTHER N-ALPHA-ACETYLTRANSFERASE 6 158 - -
Lele27g0165 167 Pfam Acetyltransferase (GNAT) family 51 132 IPR000182 GO:0016747
Lele27g0165 167 CDD NAT_SF 51 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0165 Lele-ChrLele27 1254878 1256688 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lele27g0165 Acetyltransf_1 1.4e-15 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1915 25 26852490 26856784 Lele27g0165 27 1254878 1256688 hybridization
Lele26g1958 26 23044448 23048053 Lele27g0165 27 1254878 1256688 hybridization