LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele27g0164	ATGGCCCACCTTTCTTCATTTTCCACCATGAGTTCGCTCCCAAGATATCATCATCTCAACTTCTTAACCCTTTACCACATTCTAAAACTACACCACAAAAACTCTCTCTCTCTTTCCCTGTCACTCATTCTGATAATGGCGACACAAGCTTTGGTATCTTCATCGTCTCTCACCTCGTCGGTGCAGGCTGCGAGGCAGATTACGGGAGGGAGATCAACCCAGTATCCAACTGGGTCATCTAGAAAGACTTCTTTTGTAGTGAAGGCTTCTTCTACACCTCCTGTCAAGCAAGGAGCAGACAGACCCTTGTGGTTTGCATCCAAACAGAGTCTTTCCTACTTGGATGGCAGTCTTCCAGGTGACTATGGATTTGACCCACTAGGACTCTCAGACCCAGAGGGACCAGGAGGGTTCATTGAACCCAGATGGCTGGCATATGGTGAAATCATCAACGGACGTTACGCAATGTTGGGTGCAGTAGGAGCCATAGCACCGGAAATCCTAGGCAAGGCTGGTCTAATCCCTGAGGAAACAGCACTTCCATGGTTCAAAACTGGAGTGATCCCACCAGCAGGAACCTACAACTACTGGGCTGACCCATACACCCTCTTTGTCTTTGAAATGGCTCTAATGGGCTTTGCAGAGCACAGGAGATTCCAAGATTGGGCCAAGCCCGGGTCCATGGGGAAGCAGTACTTCTTGGGCCTAGAGAAGGGCTTGGGAGGGTCCGGAGACCCGGCTTACCCGGGAGGCCCATTATTTAACCCTCTTGGATTTGGGAAGGACGAGAAGTCCATGAAGGATTTGAAGCTGAAGGAAGTGAAGAATGGGAGGTTGGCTATGTTGGCTATCTTGGGATACTTTGTACAAGGTCTTGTGACTGGTGTTGGTCCTTACCAGAACCTTCTGGATCATTTGGCTGATCCTGTGCACAACAATGTCTTGACCAGCCTCAAGTTCCATTAA	966	0.4928	MAHLSSFSTMSSLPRYHHLNFLTLYHILKLHHKNSLSLSLSLILIMATQALVSSSSLTSSVQAARQITGGRSTQYPTGSSRKTSFVVKASSTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGPGGFIEPRWLAYGEIINGRYAMLGAVGAIAPEILGKAGLIPEETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVHNNVLTSLKFH	321

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele27g0164	321	SUPERFAMILY	Chlorophyll a-b binding protein	100	317	-	-
	Lele27g0164	321	Pfam	Chlorophyll A-B binding protein	112	290	IPR022796	-
	Lele27g0164	321	FunFam	Chlorophyll a-b binding protein, chloroplastic	102	320	-	-
	Lele27g0164	321	Gene3D	Chlorophyll a/b binding protein domain	103	320	-	-
	Lele27g0164	321	PANTHER	CHLOROPHYLL A/B BINDING PROTEIN	54	316	IPR001344	GO:0009765\|GO:0016020

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele27g0164	Lele-ChrLele27	1251664	1253860	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele27g0164	64	321	Chloroplast and Mitochondria Gene Families	AT1G61520	86.434	1.05e-165	460

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele26g1959	26	23048155	23049590	Lele27g0164	27	1251664	1253860	hybridization