Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele27g0145 | ATGGGCCTCTCAAGTCTGCCAGCTCCATCTGAAGGAGTACTGTGTGTGCTTCTGGTTAACACTGCATTTTCCATATCCTTAGTTAAAGGCATTGTTAGAACAATCCTTCACATTGTTGGTATCAGCCTTTCATCATCACCCACCACCCCATCATCAGCATCACCATCACCATCACCACCATCATCATCATCAGAATCATCCCCATCTCCAGATATCTCTCAAGACCTGCCTGAGTCATTCCAATTCGACCTCTGTTCGTCGGAGAATTACATTGAAGAGTTCAGAAGCCGGACACCGACAATCCTGTACGACAGTGTGTGTGGCTGCAAGCAACCTGAAGAACATGAATGCTCTGTATGTCTGAGTAAATTTGAACCACAATCTGAGATAAACCGCTTGTCCTGTGGCCATCTATTCCACAAAGATTGCTTGGAGAAGTGGCTGGCCTACTGGAACATTACATGCCCACTTTGCAGGACTCCATTGTTGCCTGAAGAAGAGGTTTGTTCTTGCATTTGGTAA | 522 | 0.4579 | MGLSSLPAPSEGVLCVLLVNTAFSISLVKGIVRTILHIVGISLSSSPTTPSSASPSPSPPSSSSESSPSPDISQDLPESFQFDLCSSENYIEEFRSRTPTILYDSVCGCKQPEEHECSVCLSKFEPQSEINRLSCGHLFHKDCLEKWLAYWNITCPLCRTPLLPEEEVCSCIW | 173 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele27g0145 | 173 | Pfam | Ring finger domain | 116 | 159 | IPR001841 | - | |
Lele27g0145 | 173 | PANTHER | - | 1 | 167 | IPR044249 | - | |
Lele27g0145 | 173 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 111 | 163 | IPR013083 | - | |
Lele27g0145 | 173 | ProSiteProfiles | Zinc finger RING-type profile. | 117 | 159 | IPR001841 | - | |
Lele27g0145 | 173 | SUPERFAMILY | RING/U-box | 105 | 165 | - | - | |
Lele27g0145 | 173 | MobiDBLite | consensus disorder prediction | 44 | 77 | - | - | |
Lele27g0145 | 173 | SMART | ring_2 | 117 | 158 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele27g0145 | Lele-ChrLele27 | 1144888 | 1145409 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele27g0145 | 1 | 173 | C3H Transcription Factor Family | AT2G04240 | 59.091 | 2.28e-59 | 180 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele25g1930 | 25 | 26965790 | 26966299 | Lele27g0145 | 27 | 1144888 | 1145409 | hybridization | |
Lele26g1973 | 26 | 23156077 | 23156571 | Lele27g0145 | 27 | 1144888 | 1145409 | hybridization |