Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0141 ATGGACGGTGCTGGGGTTAGGGATTCGATTACGCCCAATACGAGGAAGATGATCCAAAATATCAAGGAGATCGCAGGTAATCATAGTGAAGAGGAGATTTATGCAATGCTCACGGAATGTTCTATGGATCCCAACGAGACCGCCCAGAAGCTCCTCCTTCAGGCCTGTATAGTGTTGCCTGAAGAAAGCTGTCCGCTTTCATTCTCAAATGCGTTTGTTGTTTCCTTTAATATTCTGAGTTATGGACTTTGGCCATCAGTACCTTCTTTTTTATGGAATGCGCTTCCTTTTCTTTGTACTGAGATGGGGTTCTTGGGAATTCAAAAGCTGCATCCTGCCTTTTATTTTTTGTTTCTGTTGACTAATTTTCTTCTCGTTTCTTCATCCTTTTATGCTGTTGGAAGCAAGAATTCTGATACAGGCAAAGATAATAGAACCAAGCAAGTCACTGAGAAAAGTGCACCATCATTGCCAGCTTCTCAAGAGACGAAGAACAAAGAAAGAAGATCTGAAGCTAAGTCTGCTTCTGTTATTGCCAATGGTCCTACAATTGTTGCTTCTGGAACTACTAGCAGTGTGAATCCTTCCTCCTCATTTGGTGGAAGTGAAGGAACAGGTGCATCTTTTGGTGGCAAAAATAGTTTGGGTAGTAATTTACCTTCTGATACTTCAAACAAAGGCTCTGCAATTGTTTTTGAAAATCAAGTGCTGGCTCCTCCCAATGATTTGTGGTCTTCTGGTGCTGGTGACGCCAGTAGACAGGAAGTGGGAAACCAACCTTCTGAGACTGTTAGCTCTTTCATGCAAGGAAAATTTCTTGGCAAATCCCCGGGAACCACAAAGAATCACCTTTCTGAGTCAGCCCCATCTTCTATGACGGCAACACATGCAAACACTTCAAATAGTCGTCCATCCTCTAATTATAGCAATTGCACACAACTGTTACTTGGCTCTCAGAAAGCTGGTTCTAATAAAGAGTGGAAACCAAAGCCAACAAATACAATTAATCAGGGTTCTGGACCAGCTGGTTCATCTGAGGCTACCTCCGTCTTGGCGGAGGAAACTGGGAAGTTGCAGTCAGCGCCTTGTGTTCTTGATTCTGAAGAGGCTTCTTCTAAACTGCAAAGGAAGCTGGAGGATTTACATCTTCCACAACCTCATGTTATACTTCCCAATCATATCTTTGTGCCTGATTCTGAGAAGACAAAATTTAGTTTTGGTAGTTTGGGAATGACTTTTGGAGTTCATACAAGCCATTCCAGCACCCCGGATAGTGACAAGAGTTCTACACCTCTTTCAGAAGCATCACAGGCTATTGAAGAAACAACAGATGAGCAGTCCTCAAGTCAAAAAGCTGCAGTTACTGTTGAGGTTGGAGATTATCCTGACCGTCCACAATCACCCACAACTGCACACGAGAACTTGCCATCTAGTGAGGTGGATGTGTCATCCAGTGCTATTCAGGAGTACAATGAATCCAAGCAAGATGCTGCTTTGCCATCTGGAGGACATCAACAGTCAGCAATGCAAACTTCTCCAAACTACAGTTTCGGTTTTGTGCCCCCGATGTTGGGAACTCAGCTTCCACCATTTGATAATTCTGAGCCTCAAGCACTAGATATTTCTCGGCTTCCGAGCTTTGTCGTCCATCAACCATTTGATCCAACTAGTTACTATGCCCAGTTTTACCGCTCAGGTGCTGATGGTGATGGCCGGCTTTCTCCTTTTCAATCTTCTGGGCTCTCTGCCAAGTATGGTGGCAATGTTACAGTTCTTCCTACACCAAACTCTCAATCTCCCCAAGAGCTTACTCTTTTCATTGGAATATCATTTGAGGAATGTATCAAAGCAGTTCCAACGACCATGACTTTTCCTGCCTTGTCTTCTGGAGTTGGTGGTGTCCTTTCTACAGCAGGACCAACTCCACTTGTCACTCAAGCTGCTGGGCTGATGCAAAGCTCCATAGCGGTGACTCAGCAGCCTGTCACTGTCTTTCGACCACCAAGTGGGGTCCACATATCGCATTATCCACCAAATTATATTCCCTATGGTCACTATTTCTCCCCAATTTATGTTCCACCTCCAGCAATCCACCAGTTTTTGGGTAATGGTGCATTTCCTCCACAACCTCAGGCTAGCCCTGTCTATCCGCCTCCCACAGCAGCTACTGCAGCAGGAATGAAATATCCACTTCCTCCATACAAACCCGGAACTAATGCTACAAACCCAGGTCACATTGTATTGCCAAGTGCCTATGGAGCGTATGGCTCCTCCCCAGTTGGTTATAATCCTAATTCCACAGCAACTACAGGAAATTCAAACTCTAATGAAGATCTAGGTCCTTCCCAGTTCAAGGAAAGTAATGTGTACATCAGTGGGCAGCAGAGCGAAGGTTCAGCGGTCTGGGTGGCTGCACCTGGCAGAGAAATGTCCAGTTTGCCAACTAGCTCATTCTACAGCCTTCCACCTCAAGGTCAGCACGTGACTTTTGCCCCAGCGCAGGCTGGCCATGGCACCTTTGCTGGCATCTATCACCCTGCACAAGCTGTAACAGCGGCAACGGTTCATCCGCTGCTGCAACAGTCGCAGACAATGGCCGGAGCAGTTGACATGGTGGGACCTGGAGGCAGCGTTTATCAGCAACCTCAGCATTCGCAAATGAATTGGCCGAAAGCTGGAAAATTTGCCAATAATCTTCTGACTGCTTGGGTTGAGGACATGAAAGACGATAGATCCATCTTTCTTTTCTTCACTGGGCTACTTTTGTTTAGTGTCAAATCACCGTTACCGACACTTGACTGA 2802 0.4561 MDGAGVRDSITPNTRKMIQNIKEIAGNHSEEEIYAMLTECSMDPNETAQKLLLQACIVLPEESCPLSFSNAFVVSFNILSYGLWPSVPSFLWNALPFLCTEMGFLGIQKLHPAFYFLFLLTNFLLVSSSFYAVGSKNSDTGKDNRTKQVTEKSAPSLPASQETKNKERRSEAKSASVIANGPTIVASGTTSSVNPSSSFGGSEGTGASFGGKNSLGSNLPSDTSNKGSAIVFENQVLAPPNDLWSSGAGDASRQEVGNQPSETVSSFMQGKFLGKSPGTTKNHLSESAPSSMTATHANTSNSRPSSNYSNCTQLLLGSQKAGSNKEWKPKPTNTINQGSGPAGSSEATSVLAEETGKLQSAPCVLDSEEASSKLQRKLEDLHLPQPHVILPNHIFVPDSEKTKFSFGSLGMTFGVHTSHSSTPDSDKSSTPLSEASQAIEETTDEQSSSQKAAVTVEVGDYPDRPQSPTTAHENLPSSEVDVSSSAIQEYNESKQDAALPSGGHQQSAMQTSPNYSFGFVPPMLGTQLPPFDNSEPQALDISRLPSFVVHQPFDPTSYYAQFYRSGADGDGRLSPFQSSGLSAKYGGNVTVLPTPNSQSPQELTLFIGISFEECIKAVPTTMTFPALSSGVGGVLSTAGPTPLVTQAAGLMQSSIAVTQQPVTVFRPPSGVHISHYPPNYIPYGHYFSPIYVPPPAIHQFLGNGAFPPQPQASPVYPPPTAATAAGMKYPLPPYKPGTNATNPGHIVLPSAYGAYGSSPVGYNPNSTATTGNSNSNEDLGPSQFKESNVYISGQQSEGSAVWVAAPGREMSSLPTSSFYSLPPQGQHVTFAPAQAGHGTFAGIYHPAQAVTAATVHPLLQQSQTMAGAVDMVGPGGSVYQQPQHSQMNWPKAGKFANNLLTAWVEDMKDDRSIFLFFTGLLLFSVKSPLPTLD 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0141 933 PANTHER FLOCCULATION PROTEIN (DUF1296) 131 891 IPR044277 -
Lele27g0141 933 MobiDBLite consensus disorder prediction 417 514 - -
Lele27g0141 933 MobiDBLite consensus disorder prediction 467 514 - -
Lele27g0141 933 Pfam GBF-interacting protein 1 N-terminal 11 54 IPR009719 -
Lele27g0141 933 MobiDBLite consensus disorder prediction 763 783 - -
Lele27g0141 933 MobiDBLite consensus disorder prediction 241 350 - -
Lele27g0141 933 MobiDBLite consensus disorder prediction 417 454 - -
Lele27g0141 933 MobiDBLite consensus disorder prediction 136 176 - -
Lele27g0141 933 MobiDBLite consensus disorder prediction 247 350 - -
Lele27g0141 933 MobiDBLite consensus disorder prediction 186 205 - -
Lele27g0141 933 SUPERFAMILY UBA-like 8 52 IPR009060 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0141 Lele-ChrLele27 1108685 1119169 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g0141 27 1108685 1119169 Lele01g1626 01 11331152 11336365 CCT
Lele27g0141 27 1108685 1119169 Lele02g1985 02 23508916 23513102 CCT
Lele27g0141 27 1108685 1119169 Lele03g1621 03 10593465 10597657 CCT
Lele27g0141 27 1108685 1119169 Lele04g1935 04 23859554 23864022 CCT
Lele25g1934 25 26998386 27006860 Lele27g0141 27 1108685 1119169 hybridization
Lele26g1977 26 23181435 23193874 Lele27g0141 27 1108685 1119169 hybridization