Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0116 ATGGAAGCAAGCAAAGAGGAGGCGCTTAAAGCAATAGAGATTGCTGAGAAGCGATTTGCTCAGAGAGACTTTGCAGGTGCCAAAAATTATGCATTAAAGGCAAAAGCAATATGTCCTGAATTGGAGGGAATACCTCAAATGGTGGCCACATTTCAAGTTCATTTAGCTTCTGAGGCAAAATATAATGGCGAACTAGATTATTATTCAATTCTTGGAACAAAACCTTCATCGGATAAAGAGGCAGTTAGGAAGCAGTATAGGAAGTTGGCTGTGTTGCTTCACCCGGATAAGAACAAATGTGTGGGAGCTGATGGGGCCTTTAAGCTGGTTTCTGAAGCATGGACTTGGCTATCAGATAGTGCTATGCGAAGTTCTTATGATCTCAAGAGAAATGCGCAATTGGCTGCTGGGGTCAATCAGACTAATTTGTCATCAGTCCATTCTGCAGGAACTACAGGTTATAACAAATGTTTCAATTTGCAAACTTCTCACGGTAGGCGTGATACTTTCTGGACTATTTGCACCTCATGTCAAGTCCAGTATGAGTATTTGCGTAAGTATTTGAATAAGAGACTTTCATGTAAGAACTGTCGGGGAACTTTTATTGCCGTTGAAACTGGGGCAGGCCCAGCAAATGGTTCTTTCCCTTATACTCCTTGGTCATATGTGACAGGCAATGGATATGGTGGTCATTCATTTGATAACGTCACTTATGGGCCTACCAGTACTACCTATTTCAATGGCAATGGGGTCACTGGATATCATTCTCCACATGGATATGAGTATGTTTCAAATGTTTCATTTCAGTGGAGCCCTGCTGGACATGTCAACGGACATGGTTCAACTACCCTATCTTCTGATTCTGGTTGTAAGGTCAATGGAAATAGGAAGAGAGGAAGACCAAGAATCAAATCAGCAGTTGATCAGAGGCATCAATTAGCAGACATTGCGCCCAATGTAAGTTCAGATGTATCATTCTACTGTAATGAACCTCAGGAAAGTAAGGCCACTAGACCTGATAAAAAAAGGAAAATTGTTGTGGCAGCCAGTTTCCAAAATGGCTGTGAACAAAAGGAATTGAAATTTGCTTCTGAATCAAGATTTGTTGATGGGAATGAAGGCATTGTGCATGACCAGAAACTTTCCTGTGCGAGTGAAGTTCAAACTAAGCAGTGTTCCATGGCCCCTGCATTTGAAGGGAGAAAATTACTGATTGAGAAGGCCAAGACAGATATTCAGAAGAAACTGGAAGAGATGAAATTGGCGTCTGACATTACTTCTGTTGGGGAGAAAGCAAAATCTCAAGCAGAAGTTGGTCAAGTGAATGGAGAAGAATACAGAGGAGCAGGTCTAAGTGTTTCTGACCATCAATTAGAGCATAGGAAAACTGCTTCTGTCACAATAACTGTCCCAGATTCTGACTTTCATGACTTTGATAAAGACAGGTCAGAGCAATGCTTCAGGCCGAAGCAAATATGGGCTCTATATGATGAGGAAGATGGCATGCCTCGTTTATATTGTCTAATCCGTGAGGTCATCTCTGTCAATCCATTTAGGATTTATATTAGTTATTTGAACTCCAAAACTGATAGTGAGTTTGGCCTAGTGAACTGGATAGATTCTGGTTTTACCAAATCTTGTGGAAATTTCAGGGCAGACAATTCTGATATTGTTGACAAGGTAAATATTTTCTCTCATGTTCTAACACGGGAGAAGGCTGGTCGAGGTGGTTGTATTCGCATATACCCTAGATGTGGAGATATTTGGGCTGTTTATCGAAATTGGTCTCCAGAATGGAACAGGTCAACTCCGGATGAAGTGAGGCATCAGTATGAAATGGTGGAGGTTCTTGATGATTACTCTGAGGAGCTTGGTGTTTGCGTTAGTCCCCTTATAAAGCTGGCTGGATTTAAAACAGTGTATCAAACAAATACAGACAAAAAAGCCGTTAGATGGATACCAAGAAGAGAAATGTTGCGCTTTTCACACCAAGTGCCTTCTTGGTTGCTGAAGGGAGAGACGAGCAATTTGCCAGAAAGGTGTTGGGATCTTGATCCGGCAGCAACTCCTGATGAACTTCTTCATGCTGCTACAATCACGAATGCTTTATAG 2112 0.4162 MEASKEEALKAIEIAEKRFAQRDFAGAKNYALKAKAICPELEGIPQMVATFQVHLASEAKYNGELDYYSILGTKPSSDKEAVRKQYRKLAVLLHPDKNKCVGADGAFKLVSEAWTWLSDSAMRSSYDLKRNAQLAAGVNQTNLSSVHSAGTTGYNKCFNLQTSHGRRDTFWTICTSCQVQYEYLRKYLNKRLSCKNCRGTFIAVETGAGPANGSFPYTPWSYVTGNGYGGHSFDNVTYGPTSTTYFNGNGVTGYHSPHGYEYVSNVSFQWSPAGHVNGHGSTTLSSDSGCKVNGNRKRGRPRIKSAVDQRHQLADIAPNVSSDVSFYCNEPQESKATRPDKKRKIVVAASFQNGCEQKELKFASESRFVDGNEGIVHDQKLSCASEVQTKQCSMAPAFEGRKLLIEKAKTDIQKKLEEMKLASDITSVGEKAKSQAEVGQVNGEEYRGAGLSVSDHQLEHRKTASVTITVPDSDFHDFDKDRSEQCFRPKQIWALYDEEDGMPRLYCLIREVISVNPFRIYISYLNSKTDSEFGLVNWIDSGFTKSCGNFRADNSDIVDKVNIFSHVLTREKAGRGGCIRIYPRCGDIWAVYRNWSPEWNRSTPDEVRHQYEMVEVLDDYSEELGVCVSPLIKLAGFKTVYQTNTDKKAVRWIPRREMLRFSHQVPSWLLKGETSNLPERCWDLDPAATPDELLHAATITNAL 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0116 703 CDD DnaJ 66 119 IPR001623 -
Lele27g0116 703 PANTHER BNAC03G44070D PROTEIN 1 690 - -
Lele27g0116 703 Pfam Domain of unknown function (DUF3444) 467 673 IPR024593 -
Lele27g0116 703 MobiDBLite consensus disorder prediction 280 300 - -
Lele27g0116 703 PRINTS DnaJ domain signature 68 86 IPR001623 -
Lele27g0116 703 PRINTS DnaJ domain signature 86 101 IPR001623 -
Lele27g0116 703 PRINTS DnaJ domain signature 102 122 IPR001623 -
Lele27g0116 703 SUPERFAMILY Chaperone J-domain 57 131 IPR036869 -
Lele27g0116 703 Pfam DnaJ domain 66 127 IPR001623 -
Lele27g0116 703 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Lele27g0116 703 Gene3D DnaJ domain 53 151 IPR036869 -
Lele27g0116 703 SMART dnaj_3 65 122 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0116 Lele-ChrLele27 938021 940132 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0116 4 302 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.581 9.17e-30 119