Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0072 ATGAGGAAAAGGGAGAGGGAAAATCCTTGTGGGGTATGTGGCCACTATCACAAATACGAAGAAGGGGAAGTTTGTTCGATTTGTGGACACCGCATTCCGGCAGCATCGGAGAAAACTTCAATCCGAGTCAGCGCCTTTCCTTCCGTGATTTTGCCAGAATTTCTTTACTTGGGCAGTTATGATAACGCATCACGTTCGGAGCTTCTCAAGACTCAGGGAATCTCTCGAATCCTCAATACGGTTCCTTCTTGTCAAAATCTCTACAGAAACTCATTTACCTATCACTGTCTCACAGATGACAAAACTTTGCCATTTAATGAAGCGATTCAGTTTATAGAGGAATGTGAGAAGGACAAGGCCCGGGTTCTGGTTCATTGCATGTCAGGGAAGAATAGGTCCCCAGCGATTGTGATTGCTTACCTGATGAAGTCCAAGGGTTGGAGACTCCCCCAGAGCTACCAGTGGGTAAAAGAGAGGAGGCCTTCTGTAGAATTAACTGAAGGTGTTTACCAGCAACTGCAGGAGTATGAGCGCAAGATCTATGGATCGTTTGACACTGGCAGCTCTCCTTTGTTCGGGTTCTCAGCTCCAGCACCTCCTCCCATTAGTTTTGGCTACCCAAAAATTAATGATCCAGCAGCTCCTCTTCCTGCCTTCAGCAATCCTGGCGCTCCCTCAATCTTTGCCCAAGCTCCCTTAGATGTTCCCCCGACAGCCTTTACTTTTGGATCTGGCCAGACTCAAAACAGTGTGATTGGGAGCCCATTTAATGCCAATCCACCAAATCGAACCGGCAGCGACACCCAAATGGATGGTTCTTGA 822 0.4757 MRKRERENPCGVCGHYHKYEEGEVCSICGHRIPAASEKTSIRVSAFPSVILPEFLYLGSYDNASRSELLKTQGISRILNTVPSCQNLYRNSFTYHCLTDDKTLPFNEAIQFIEECEKDKARVLVHCMSGKNRSPAIVIAYLMKSKGWRLPQSYQWVKERRPSVELTEGVYQQLQEYERKIYGSFDTGSSPLFGFSAPAPPPISFGYPKINDPAAPLPAFSNPGAPSIFAQAPLDVPPTAFTFGSGQTQNSVIGSPFNANPPNRTGSDTQMDGS 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0072 273 ProSiteProfiles Dual specificity protein phosphatase domain profile. 46 182 IPR020422 GO:0006470|GO:0008138
Lele27g0072 273 ProSitePatterns Tyrosine specific protein phosphatases active site. 124 134 IPR016130 GO:0016311|GO:0016791
Lele27g0072 273 SMART dsp_5 46 179 IPR020422 GO:0006470|GO:0008138
Lele27g0072 273 MobiDBLite consensus disorder prediction 240 273 - -
Lele27g0072 273 Pfam Dual specificity phosphatase, catalytic domain 55 178 IPR000340 GO:0008138|GO:0016311
Lele27g0072 273 CDD DSP_plant_IBR5-like 47 176 - -
Lele27g0072 273 Gene3D Protein tyrosine phosphatase superfamily 40 185 IPR029021 -
Lele27g0072 273 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 1 273 IPR044212 GO:0009734|GO:0009738|GO:0033549|GO:0043407
Lele27g0072 273 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 103 171 IPR000387 GO:0016311|GO:0016791
Lele27g0072 273 FunFam Protein-tyrosine-phosphatase IBR5 36 186 - -
Lele27g0072 273 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 47 182 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0072 Lele-ChrLele27 570472 576354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0072 1 166 Protein tyrosine phosphatase (PTP) family AT2G04550 73.964 6.55e-97 280