Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0068 ATGTCCGCTTCGGAGCGCAACAATTTGTGGACCTTCGACTCTGACCTCGACGGCATCGACCTTGACCCCTCCGATTTCGGCTCCTCCATCCCACTCAAGAAGGTCACCAACGGCGACGTTTTCGCGGCCTCTCGCGCCGGCGACGTTGACCGCCTCCGGTACCTCCTCGAGTCCGGAGTCAACGTCAATGCTCGGGACCAGTGGGATTCTGTCGCTCTCTACTATGCTTGCCTTGCTGGTCACCTCGATGCTGCTCGCATGTTGCTCGAGAGTGGTGCAATCTGCTCTGAGCACACATTTGACGGTGACCGTTGCCACTACGCCGCCCTTAATTTGAAAGTCAGGAAGTTGTTGAAGGCATTTGAGGCAAGACCGCCGCCTCTGGGTCCCTTGCAGGCGGCGCTGAGAGATACTTTTTTGGGTTGTGCAGCTAATAGGGCCTACTTGGAGCTTGCTGATTCTCAATTTCAAACTTCGGGTATATCATCAGCTCAGGGATTCTATTGCAACCACTTTCCTCCGGATGTGGTTTTCTATGTATCAGGAAGACCTATTGAGGCTCACAGAGTGATATTAAGTGCGAGGTCACCATTTTTCAAGAAAAAGTTTGAGAGTGATTGGAAAGAGCGCAGGGAAGTAAGATTCTCTACGGAGAAGTTGTCCTTTCCTGCTCTCTATAGCCTCTTGCACTTCTTTTATTCTGACAGATTAGAGATTGCTGTAGATGACATGGAAGATCTTGTGAGAATCTGTAAAGTATGCAAATGCGAATCACTACAGGCAATTCTGGAGAAAGAACTAATTCATCAAAAATATGCAGAGTATAAAGCGCTGAGAGATTTGGACAATTCTCAAAAGCGGTTCATTTTACAGGGTTTATCCCTTCCTGAAGAGGACAGGCTTCCTGCATCCTTGCATCGAATCCTTTGTATTGCCCTTTCAAATTCAACTCAAGAAAATGTTCTAGATGGTGGAATTGATAAATTGGCCCTTCGGGTGGATGCAATGCAAATTGCTAATTCTATGGATGATCTTGCAGATGTTTGTATAAGAGTTGATAAAAAAGTTTTCCGTTGCCATCAAGTTATTTTAGCATCAAGGTCAGAATACTTCAAAGCAAGATTGTCACGTATACAGGACTTCCATGAAGGGAAAGATGAGTCATCTGTTGATTCCCTTCCTTGTCTTGAAGAACGTGATTTGAGCAAGGAATCATTTGAGAAAATGATTGAGTATATGTACACTGATGGTCTGAAGGACATTGATCCGGATCAGGCAGAGGAAATGTTTGATGCGGCTTCTAGGTATTTATTGTTTCCTCTAAAGCGTGCTGTGGCTGATGCTCTGCTGCCGCACTTGGAAATGGTTTCACCTGCAGAACTTTGCCATTGGTTGATACTGGCAGACATGTATGGTGTCTTGAAGATACGGGAATATTGTCTAGATACCATAGCTTGTAATTTTGAAACATTTGCTGATACTAAAGAATTCCGAGCAATGCTATTGACGCTGCCGCCACCATCCGGAGATTCCTCTCTACGTACCACTGCCCCAAGTGTTCCCGGAGCTGCTCTGAACACCGATCAAGGGAATCTTCTTGATGATTTACGAGAGAAATGGCTTGAAATTGAAGCTGCCGAGCTTGATGAGAGAGATGAGAGCGCATTGCATTTTGACAAGCGTCTAGAGATGCTTATGCTTGTTGCAGAGCAAGAAAAAATAGGCAATACTGAATCAGATGATATTGAGAATGTGGCATCCTCAGCTCTTTCTGAAACCTCTATTCAAATTTCTACTGAACAAGAACTGTAG 1812 0.452 MSASERNNLWTFDSDLDGIDLDPSDFGSSIPLKKVTNGDVFAASRAGDVDRLRYLLESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDRCHYAALNLKVRKLLKAFEARPPPLGPLQAALRDTFLGCAANRAYLELADSQFQTSGISSAQGFYCNHFPPDVVFYVSGRPIEAHRVILSARSPFFKKKFESDWKERREVRFSTEKLSFPALYSLLHFFYSDRLEIAVDDMEDLVRICKVCKCESLQAILEKELIHQKYAEYKALRDLDNSQKRFILQGLSLPEEDRLPASLHRILCIALSNSTQENVLDGGIDKLALRVDAMQIANSMDDLADVCIRVDKKVFRCHQVILASRSEYFKARLSRIQDFHEGKDESSVDSLPCLEERDLSKESFEKMIEYMYTDGLKDIDPDQAEEMFDAASRYLLFPLKRAVADALLPHLEMVSPAELCHWLILADMYGVLKIREYCLDTIACNFETFADTKEFRAMLLTLPPPSGDSSLRTTAPSVPGAALNTDQGNLLDDLREKWLEIEAAELDERDESALHFDKRLEMLMLVAEQEKIGNTESDDIENVASSALSETSIQISTEQEL 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0068 603 ProSiteProfiles BTB domain profile. 174 241 IPR000210 GO:0005515
Lele27g0068 603 SUPERFAMILY POZ domain 155 269 IPR011333 -
Lele27g0068 603 Gene3D Potassium Channel Kv1.1; Chain A 336 495 IPR011333 -
Lele27g0068 603 SMART BTB_4 346 453 IPR000210 GO:0005515
Lele27g0068 603 SMART BTB_4 174 271 IPR000210 GO:0005515
Lele27g0068 603 FunFam BTB/POZ domain-containing protein 168 290 - -
Lele27g0068 603 ProSiteProfiles BTB domain profile. 346 422 IPR000210 GO:0005515
Lele27g0068 603 FunFam BTB/POZ domain-containing protein 34 157 - -
Lele27g0068 603 CDD BACK 462 500 - -
Lele27g0068 603 Pfam BTB/POZ domain 344 449 IPR000210 GO:0005515
Lele27g0068 603 Pfam BTB/POZ domain 170 270 IPR000210 GO:0005515
Lele27g0068 603 SUPERFAMILY POZ domain 341 452 IPR011333 -
Lele27g0068 603 Gene3D - 23 160 IPR036770 -
Lele27g0068 603 ProSiteProfiles Ankyrin repeat profile. 43 67 IPR002110 GO:0005515
Lele27g0068 603 Pfam Ankyrin repeats (many copies) 41 89 IPR002110 GO:0005515
Lele27g0068 603 Gene3D Potassium Channel Kv1.1; Chain A 161 289 IPR011333 -
Lele27g0068 603 CDD BTB_POZ_ZBTB_KLHL-like 345 436 - -
Lele27g0068 603 PANTHER ANKYRIN REPEAT AND BTB/POZ DOMAIN-CONTAINING PROTEIN 1 12 569 IPR044515 -
Lele27g0068 603 SUPERFAMILY Ankyrin repeat 42 119 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0068 Lele-ChrLele27 527897 531513 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lele27g0068 BTB 3.8e-15 CL0033