Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0054 ATGGCAACAATGTCGGATGACGTGCTTGTGCATTTCTCGTCCAACTCCTCCAACCAATCGGATCAGTCCTTGCCTACCAAGATTGCAAAGCTTGAAGCTCGAATGGTCGGCAAGGCTTCGCCCGCAGTTGCCACCACTCCGTCATCTGCTCAGCAGTCAACTTGGTCTTCTGTTCCTTCAGCTGCGAAATTTGGGGGGCCTGCCGAGGATCTGGCTGGACCCTCCACTTCGAGTGATTCCGATGATGATAACGGTGGGGAATTCCTTATACAAGCTAACACACAGAAGCGCCAAAAACTTCAAAAAGATGACCACTCAGAGATTTTTGAACATGTTGAGGTAGTTACCGATGGAAGGCAGACTAGTTTGGATGCTGTGGAGGCAAAAGTTAGTGCTGATGTGAATAGGAAAAAAAATGGTCGTGGAAGAGGGAGTTCTGGTACCGGTAGGGGACGTGGTTCCAGAGTTACTGATCAGACCAGAACACAAATTTCTCCTCCAGCAGTTTTGGCCTCCAATGGTCAGCTTGACAATGCATGCCATAGAGAGGGAAGACTCAAAGATCAGATTCGCAGTGACAATTGCACCTCATTAGAGGAGGAGAATGCATCTTTACGTGCAAAATTTGTTGCATTGGAGGAGGACCTGCGGAAATCAAAACAAGAGATGTCCGATTATCAGAACCTTTGCCGCCAGTTAGAAAAGGAACTAAAGGACCTGAAAGATCACGAACAGCAAATGAAGCCCAAGAGGACAAAAATAATATCTGATTTGCTGATATCAGTTTCAAAGTCTGAGAGGCAAGAGGCACGGTTGAAAGTACGACAAGACTCATTGAGACTGGGGAATGTTGGTGTAATAAGAGCGGGAACTGTCATATCCGAGACTTGGGAAGATGGGCAAGCATTGAAGGATCTTAATGCCCAACTTAAACAACTGATAGAAACGAAAGAGGCTATTGAACGGCAACGCAAGTTATTGAAGAAAAAACAATCTGATAAAGGCGAGGGGACAGATGCAGATACTGGATTACAAGAAGACGAAGTCATCATTCAGGATGAAATCTATAAGTCTCGACTAGCTAGCATTAAACGTGAAGAAGAAGTTATCATGCGAGAGAGGGATCGCTATGAACTAGAAAAGGGAAGACTAATACGTGAGATGAAACGCATACGAGATGAGGATGGTTCACGTTTTAACAACTTTCAGATTCTGAACCATCGATATGCCCTGTTAAATCTTCTTGGAAAGGGGGGATTCAGCGAGGTTTACAAGGCTTTTGACTTGGTGGAGCATAGATATGTTGCATGTAAGCTTCATGGTTTAAATGCTCAATGGAGTGAAGAGAAGAAGCAGAGTTACATTCGGCATGCAATTCGGGAGTATAATATCCACAAGACCTTGGTACACCATCACATTGTTCGTTTGTGGGACATCTTTGAGATAGATCACAATACATTCTGTACCGTTTTAGAGTACTGTAGTGGGAAGGATCTTGATGCTGTCCTTAAGGCAACACCTGTATTGCCTGAGAGAGAGGCAAGGGTAATCCTAGTTCAGGTTTTTCAAGGCCTTGTTTACATGAATAAAAGAACGAAGAAGATTATTCATTATGATTTGAAGCCTGGAAATGTTTTGTTTGATGAGCTTGGCATTGCTAAAGTGACTGATTTTGGTCTCAGCAAAATAGTTGAGGATGATGTGGGATCCCAGGGTATGGAACTAACATCTCAAGGGGCTGGAACTTACTGGTATTTGCCACCGGAATGCTTTGAGCTCAGTAAGACACCTCTTATATCATCGAAGGTTGATGTCTGGTCTGCCGGTGTTTTGTTCTATCAAATGCTCTTTGGAAGACGTCCATTTGGCCACGACCAAACTCAAGAGCGTATACTACGTGAAGATACAATCATTAAGGCTCGCAAGGTTGAATTCCCTTCTAGACCTACGGTTTCTAATGAGGCAAAGGATTTTATACGGCGATGTCTGACATATGACCAGGCCGAGCGACCAGATGTACTGAGCATTTCTCAAGACCCATATCTTACCTACTTAAAGAAGTAA 2064 0.4394 MATMSDDVLVHFSSNSSNQSDQSLPTKIAKLEARMVGKASPAVATTPSSAQQSTWSSVPSAAKFGGPAEDLAGPSTSSDSDDDNGGEFLIQANTQKRQKLQKDDHSEIFEHVEVVTDGRQTSLDAVEAKVSADVNRKKNGRGRGSSGTGRGRGSRVTDQTRTQISPPAVLASNGQLDNACHREGRLKDQIRSDNCTSLEEENASLRAKFVALEEDLRKSKQEMSDYQNLCRQLEKELKDLKDHEQQMKPKRTKIISDLLISVSKSERQEARLKVRQDSLRLGNVGVIRAGTVISETWEDGQALKDLNAQLKQLIETKEAIERQRKLLKKKQSDKGEGTDADTGLQEDEVIIQDEIYKSRLASIKREEEVIMRERDRYELEKGRLIREMKRIRDEDGSRFNNFQILNHRYALLNLLGKGGFSEVYKAFDLVEHRYVACKLHGLNAQWSEEKKQSYIRHAIREYNIHKTLVHHHIVRLWDIFEIDHNTFCTVLEYCSGKDLDAVLKATPVLPEREARVILVQVFQGLVYMNKRTKKIIHYDLKPGNVLFDELGIAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGVLFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPTVSNEAKDFIRRCLTYDQAERPDVLSISQDPYLTYLKK 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0054 687 ProSitePatterns Protein kinases ATP-binding region signature. 415 438 IPR017441 GO:0005524
Lele27g0054 687 MobiDBLite consensus disorder prediction 128 163 - -
Lele27g0054 687 CDD STKc_TLK 408 681 - -
Lele27g0054 687 FunFam Serine/threonine-protein kinase TOUSLED 400 687 - -
Lele27g0054 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 535 547 IPR008271 GO:0004672|GO:0006468
Lele27g0054 687 ProSiteProfiles Protein kinase domain profile. 409 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g0054 687 SUPERFAMILY Protein kinase-like (PK-like) 401 683 IPR011009 -
Lele27g0054 687 Coils Coil 303 333 - -
Lele27g0054 687 MobiDBLite consensus disorder prediction 42 60 - -
Lele27g0054 687 MobiDBLite consensus disorder prediction 73 87 - -
Lele27g0054 687 Gene3D Transferase(Phosphotransferase) domain 1 400 687 - -
Lele27g0054 687 SMART serkin_6 409 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g0054 687 MobiDBLite consensus disorder prediction 1 87 - -
Lele27g0054 687 MobiDBLite consensus disorder prediction 8 26 - -
Lele27g0054 687 Coils Coil 360 394 - -
Lele27g0054 687 PANTHER MIXED LINEAGE PROTEIN KINASE 15 686 - -
Lele27g0054 687 Coils Coil 195 246 - -
Lele27g0054 687 Pfam Protein kinase domain 410 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0054 Lele-ChrLele27 446231 453196 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0054 392 682 MAP Kinase Kinase Kinase AT3G13530 27.551 3.51e-27 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TLK Lele27g0054 Pkinase 1.5e-59 CL0016