Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0045 ATGAAGGTATTTGCCGTTTATGCTAGTGTGAGTCTATTTGCTTTGCTTTGTGTCACAAGCGAAGCGAATCAGCAGGCAGAAAGGCTTCAAGAACTGATTGCATCAAAGAGATATTCAAAGAATAGCAAAGTTGATCATCTGATAAATTCATGGTCATTAGAAAAACAAGAGGGATTAAGGAAGGCTGATAAGATTAGTTCATTGCCTGGACAGCCTCATGGGGTCAATTTTGATCAATATTCAGGTTATGTCACTGTTGATCCAAAAGCTGGAAGAGCCCTTTATTATTATTTTGTGGAGTCTCCATATAACCCTTCCACTAAACCTCTAGTGTTGTGGCTCAATGGAGGACCAGGTTGTTCCTCACTTGGCTATGGGGCCATGCAGGAATTGGGACCCTTCAGAGTCAACTCTGATGGAAAAACACTGTTTGATAATAAATATTCTTGGAACACAGTGGCAAACGTGTTGTTCTTGGAATCCCCAGCAGGAGTAGGGTTTTCGTTCTCAAACACTTCATCGGATTATGAAAAAGCAGGCGATAGGTTTACAGCGAAAGATTCATATGTGTTCCTCATCAATTGGCTTAAGAGATTCCCACAATACAAATCCAGAGATTTCTTCATCACTGGAGAGAGCTATGCTGGCCACTACGTGCCTCAGCTTGCTCAAACCATTTTCGTCCACAACAAACAAAAACCCAGAACCTTTATCAACCTCAAAGGCATTGCAATGGGGAATCCATGGAGTTGGGTTGATGATGAAACAAGTAACAAGGGAGTGTATGATTACTTCTGGACACATGCTGTGATCTCTGATGAAACCCATGAAGCTATTGATAAGCACTGTGATAACTTTGCTTCAGAAAGTGTTTCAGATGAGTGTGTGAACTCCACAAATAAAGCGTACGAGGAGATAGGGAACATAGATTGGTATAATATTTATGCTCCAATCTGTCACGACTTTTCGATCAGAGATAATGGCCCACCAGGTTCTGTATATAACTATGATCCATGCTCTGAGACTTATGTGAAAGTCTACTTGAATAACCCAGAGGTTCAGCGAGCTCTCCATGCACTCCCCACAAATTGGACTCATTGCAGGAATTATAAATGGATAGACAGCCCAAGTAGCAGCCTGCCCACAATCAAGTATCTCATAGCAAGTGGCATTAGATTCTGGATTTACAGTGGGGACACAGATGGAAATGTGCCAGTCACATCGTCAAGGTACTCCATCAACAAGCTCAACCTTCCTGTCCAGGTTCCTTGGCGTCCATGGTATTCTGGAAATGAGGTAGGAGGATATGTGGAGGAATACAAAGGACTAACATTTGTGACAGTGAGAGGATCAGGGCATGAAGTTCCGAGTTGGCAACCTGAGAGGGCTCTCACTCTTTTCACTTCTTTCCTTAACCACTCTCTCCCTCCTTCCCCCTTTGCATAA 1446 0.4281 MKVFAVYASVSLFALLCVTSEANQQAERLQELIASKRYSKNSKVDHLINSWSLEKQEGLRKADKISSLPGQPHGVNFDQYSGYVTVDPKAGRALYYYFVESPYNPSTKPLVLWLNGGPGCSSLGYGAMQELGPFRVNSDGKTLFDNKYSWNTVANVLFLESPAGVGFSFSNTSSDYEKAGDRFTAKDSYVFLINWLKRFPQYKSRDFFITGESYAGHYVPQLAQTIFVHNKQKPRTFINLKGIAMGNPWSWVDDETSNKGVYDYFWTHAVISDETHEAIDKHCDNFASESVSDECVNSTNKAYEEIGNIDWYNIYAPICHDFSIRDNGPPGSVYNYDPCSETYVKVYLNNPEVQRALHALPTNWTHCRNYKWIDSPSSSLPTIKYLIASGIRFWIYSGDTDGNVPVTSSRYSINKLNLPVQVPWRPWYSGNEVGGYVEEYKGLTFVTVRGSGHEVPSWQPERALTLFTSFLNHSLPPSPFA 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0045 481 Gene3D alpha/beta hydrolase 60 321 IPR029058 -
Lele27g0045 481 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 64 460 IPR001563 GO:0004185|GO:0006508
Lele27g0045 481 FunFam Carboxypeptidase 379 473 - -
Lele27g0045 481 ProSitePatterns Serine carboxypeptidases, serine active site. 209 216 IPR018202 GO:0004185
Lele27g0045 481 Gene3D - 339 370 - -
Lele27g0045 481 FunFam Carboxypeptidase 335 475 - -
Lele27g0045 481 Gene3D - 379 472 - -
Lele27g0045 481 SUPERFAMILY alpha/beta-Hydrolases 62 474 IPR029058 -
Lele27g0045 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 169 IPR001563 GO:0004185|GO:0006508
Lele27g0045 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 195 220 IPR001563 GO:0004185|GO:0006508
Lele27g0045 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 146 158 IPR001563 GO:0004185|GO:0006508
Lele27g0045 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 443 456 IPR001563 GO:0004185|GO:0006508
Lele27g0045 481 ProSitePatterns Serine carboxypeptidases, histidine active site. 443 460 IPR033124 GO:0004185
Lele27g0045 481 FunFam Carboxypeptidase 59 321 - -
Lele27g0045 481 Pfam Serine carboxypeptidase 69 472 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0045 Lele-ChrLele27 358319 361766 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0045 344 472 Calmodulin-binding Proteins AT2G22960 30.597 7.56e-13 65.5