Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0044 ATGAAGATCATAGTTGTTCTTTATGCTTGTGTGGCCCTTTTTGCTTTGCTTTCTTTTACAAGCAAAGCCAATCAGGAAAATAATCTGGGAGATCTGATTCTATCCGAGAGAATAAAGAACAAACTTCGTCTGACAAGTTCTTGGGAAGAAGATGTGTCCAAACAGCAATATTATGTTTCACCCCAAGAACAAGAAGGGTTAATGCAGGCTGATAAGATTAGTGCAATGCCTGGACAACCTTATGCGGTTAATTTTAATCAATACTCAGGTTATGTCACAGTTGATCCACAAGCTGAAAGAGCCCTTTTTTATTACTTTGTTGAGTCTCCATATAACTCTTCAACTAAACCACTAATGTTGTGGCTCAATGGAGGGCCTGGTTGTTCTTCATTAGGCTATGGTGCCTTTCAGGAATTGGGGCCCTTCAGAGTTAACTCGGATGGAAAAACTCTGTTCCTTAACAAGTATGCTTGGAACAATGTGGCAAATGTGTTGTTCTTGGAATCACCAGCTGGAGTTGGCTTTTCCTACTCAAACACTTCTTCAGACTATGCTCGAGCAGGCGATAACTTTACGGCGAATGATGCATACACCTTCCTCATCAATTGGCTTGAGAGATTCCCACAATACAAATCCAGAGATTTCTTCATCACCGGAGAAAGCTATGCTGGTCATTATGTTCCCCAGCTTGCTTACACCATTTTGGTCCAAAATATATTCAAAAGACAAACCATTATTAACCTCAAAGGCATTGCTATAGGGAATGCTTGGATTGATGATGAAACATCCGTAAAGGGAATATTCGATTACTTATGGACTCATGCTCTAATCTCAGATGAAACCTATGCAACTATTGATAAGTACTGTGACTTTGCTTCTCATAATAATTCAAACGTATGTGTCAATGCAACATTCAAGACTAATCAGGAGGCAGGGCAGATAGATTGGTACAACATTTATGCTCCACTCTGCCATGAGGCTTCACTAAGAAATGGTCCACCTGGTTCTGTGGACAATTATGATCCATGTTCTAATTACTCTGTGAATGCCTATATGAATAACCCAGAGGTTCAGCAAGCTCTCCATGCACTTCCCACAAACTGGACTCATTGCAGACATTATAACTGGACAGATCGCCCAAGTACGATCCTACCCATCATCAAGTATCTCATCACAAGTGGTATGAGAGTTTGGATTTACAGTGGGGACACAGATGCTGTTGTGCCAGTCACATCTTCAAGGTACTCAATCAACCGTCTTAACCTTTCTGTTGAGGTTCCATGGCGACCTTGGTACTCAGGAAATGAGGTAGGCGGATATGTGGAGCAATACAAAGAAGTAACATTTGTGACAGTGAGAGGAGCTGGCCACACTGTTCCTAGTTGGCAACCAGCAAGAGCCCTCACCTTCTTCACTTCTTTCCTCAAACACTCTCTCCCTCCCGCTTCGCCATGGCCATAA 1461 0.4209 MKIIVVLYACVALFALLSFTSKANQENNLGDLILSERIKNKLRLTSSWEEDVSKQQYYVSPQEQEGLMQADKISAMPGQPYAVNFNQYSGYVTVDPQAERALFYYFVESPYNSSTKPLMLWLNGGPGCSSLGYGAFQELGPFRVNSDGKTLFLNKYAWNNVANVLFLESPAGVGFSYSNTSSDYARAGDNFTANDAYTFLINWLERFPQYKSRDFFITGESYAGHYVPQLAYTILVQNIFKRQTIINLKGIAIGNAWIDDETSVKGIFDYLWTHALISDETYATIDKYCDFASHNNSNVCVNATFKTNQEAGQIDWYNIYAPLCHEASLRNGPPGSVDNYDPCSNYSVNAYMNNPEVQQALHALPTNWTHCRHYNWTDRPSTILPIIKYLITSGMRVWIYSGDTDAVVPVTSSRYSINRLNLSVEVPWRPWYSGNEVGGYVEQYKEVTFVTVRGAGHTVPSWQPARALTFFTSFLKHSLPPASPWP 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0044 486 Gene3D - 343 377 - -
Lele27g0044 486 Gene3D alpha/beta hydrolase 68 326 IPR029058 -
Lele27g0044 486 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 72 464 IPR001563 GO:0004185|GO:0006508
Lele27g0044 486 FunFam Carboxypeptidase 67 326 - -
Lele27g0044 486 ProSitePatterns Serine carboxypeptidases, histidine active site. 447 464 IPR033124 GO:0004185
Lele27g0044 486 ProSitePatterns Serine carboxypeptidases, serine active site. 217 224 IPR018202 GO:0004185
Lele27g0044 486 Pfam Serine carboxypeptidase 77 476 IPR001563 GO:0004185|GO:0006508
Lele27g0044 486 SUPERFAMILY alpha/beta-Hydrolases 72 477 IPR029058 -
Lele27g0044 486 FunFam Carboxypeptidase 383 477 - -
Lele27g0044 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 447 460 IPR001563 GO:0004185|GO:0006508
Lele27g0044 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 154 166 IPR001563 GO:0004185|GO:0006508
Lele27g0044 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 203 228 IPR001563 GO:0004185|GO:0006508
Lele27g0044 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 177 IPR001563 GO:0004185|GO:0006508
Lele27g0044 486 Gene3D - 383 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0044 Lele-ChrLele27 354585 356908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0044 351 475 Calmodulin-binding Proteins AT2G22960 30.370 2.00e-11 61.2