Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0034 ATGGCTCCTGTGTCCCTTCAGCGAGATGATGGTCCATCTGACAGCATGGTGGTTCTCCCCTGTCTGAAATCAATGACTTGGGTAATGGAGAACAAAAATTCAACTCCTGGGAATAGAGTAGCTGTTATCAATTTGAAGCTGCAAGATTACAGCAGGACTCCATCAGCAGAATCTGAAGTGAAGTTTCAGCTCTCAAGAGTTTCTTTGGAACCAATGTTGAGGTCTATGGCCTACATCAGTGAGCAGCTCTCAACACCAGTTAATAAGGTTGCTGTAATAAATCTCAAGCTTCAAGATACCGAGACAACTTCTGGGGAGTCTGAAGTGAAGTTTCAGGTGTCCAGGGACACATTGGATGCCATGTTACGATCAATGGCTTATATTCGTGAGCAACTCTCTCATGCTGGAGACTCGCAGTCAGAGCCTGTATGGAAAAGGCAACGAAAATAA 450 0.4467 MAPVSLQRDDGPSDSMVVLPCLKSMTWVMENKNSTPGNRVAVINLKLQDYSRTPSAESEVKFQLSRVSLEPMLRSMAYISEQLSTPVNKVAVINLKLQDTETTSGESEVKFQVSRDTLDAMLRSMAYIREQLSHAGDSQSEPVWKRQRK 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0034 149 Pfam COMM domain 81 128 IPR017920 -
Lele27g0034 149 PANTHER COMM DOMAIN-CONTAINING PROTEIN 9 86 138 IPR037360 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0034 Lele-ChrLele27 263503 265770 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g0034 27 263503 265770 Lele28g2097 28 23889099 23891256 ECH
Lele27g0034 27 263503 265770 Lele27g0034 27 263503 265770 ECH
Lele25g2045 25 27799389 27803838 Lele27g0034 27 263503 265770 hybridization
Lele26g2098 26 24019228 24021466 Lele27g0034 27 263503 265770 hybridization