Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0030 ATGGCAGACAAGGCGGTCATTGATGTACTTCATCCTGGGAGGCCAAACGTGTCCAAGTTTAGAACTCATTTTGGAGGCGGGAAATCAACTGGATTTGGTTTAATTTATGATTCCGTTGAAAATGCGAAGAAGTATGAGCCCAAGTACAGACTTATCAGGATGCTGAATTTGTTAACAGTTCGTTTTGTTACCAATTCCTTTGGTATTTTTATGATTTTCTTTGTATTCTGCGTGCTTTGTTCAATTTTGATGCAATTGAAACCGTGTTTTCTTCTGTGGCAGAATGGACTCTCCACTAAGGTAGAGAAGTCAAGGAAGCAAATGAAAGAGAGGAAGAACCGGGCTAAGAAGATCCGTGGAGTGAAGAAGGTCAAGGCTTCTGAGTCAGCAAAGAAGAAATGA 402 0.408 MADKAVIDVLHPGRPNVSKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRMLNLLTVRFVTNSFGIFMIFFVFCVLCSILMQLKPCFLLWQNGLSTKVEKSRKQMKERKNRAKKIRGVKKVKASESAKKK 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0030 133 MobiDBLite consensus disorder prediction 109 133 - -
Lele27g0030 133 ProSitePatterns Ribosomal protein S24e signature. 24 46 IPR018098 -
Lele27g0030 133 MobiDBLite consensus disorder prediction 103 133 - -
Lele27g0030 133 Gene3D - 17 133 - -
Lele27g0030 133 Pfam Ribosomal protein S24e 17 54 IPR001976 GO:0003735|GO:0005840|GO:0006412
Lele27g0030 133 PANTHER 40S RIBOSOMAL PROTEIN S24 17 54 IPR001976 GO:0003735|GO:0005840|GO:0006412
Lele27g0030 133 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 6 54 IPR012678 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0030 Lele-ChrLele27 237283 238529 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0030 6 132 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 48.667 3.89e-37 121