Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0028 ATGATGCATATACTAGGGAAAAAAGCTCTTTCTCTTGCTACAATAGGGTATGGTATTAGGCGTTTTGCGACTGCATCTTTTGTGCCTGTTGACAGTTGCATGATGAATTTCCTTTTGACTTGTGACAGAAGGAATGCTCAGCAAAAGGAAAGTACACATATCTGCGGGTATTGCAAGAAGGTGTTCGACAGCTACCAGGCGCTTGGAGGCCATTTAAGGTCACATCAAAACATGACGCGGAAATTTCCATATCTTCAAAGCCACAGCGACTCTATCCATGATACCCACCCTTATTTTAATCCATTATCCAATTATCGTGCTTCCAGAGAAAACCATTGTGGGAATGAGACTGAATCGATCCTGTCTTCGCATCTCTCCGGTGCATCTCTTATGGATAACGTTAAACGTGGTGGCTCAACTGGTTCTTGCAAGTTTGATGTGGAGTCTATGGATTATGCTCCTCGTATTACTAAACTTGACACGAATAAATATCTTGGTACGGAGAACCCGTTTCTTGCAGGCCTCTTGCCTCCACCTCCACTTCATGGTCAACTTACTGTGTTAATGTGTCCAAAGGAATATATTAGGGCCCTAACTTGTGGGAGAGAGAACAAGCGTTGCTTGTGCCGAGATTTAGCTGATGAAGTCATGATGATGCGTGCACCGAAAAGACCGCGGGTGAGCTCCAGTTCACAAGTAGAAAACCACCTCAGAATGAGTTGCTTCTCTTCAAGGAATCAAATAACTATTCTTCTGGATCAGAGATTCCGACCGGTGGAGAGGAGAAATGTGAAGCAAATCTGGATCTCTCGCTTCATCTCTAGTCCCTAG 831 0.4416 MMHILGKKALSLATIGYGIRRFATASFVPVDSCMMNFLLTCDRRNAQQKESTHICGYCKKVFDSYQALGGHLRSHQNMTRKFPYLQSHSDSIHDTHPYFNPLSNYRASRENHCGNETESILSSHLSGASLMDNVKRGGSTGSCKFDVESMDYAPRITKLDTNKYLGTENPFLAGLLPPPPLHGQLTVLMCPKEYIRALTCGRENKRCLCRDLADEVMMMRAPKRPRVSSSSQVENHLRMSCFSSRNQITILLDQRFRPVERRNVKQIWISRFISSP 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0028 276 ProSitePatterns Zinc finger C2H2 type domain signature. 55 75 IPR013087 -
Lele27g0028 276 SUPERFAMILY beta-beta-alpha zinc fingers 49 77 IPR036236 -
Lele27g0028 276 ProSiteProfiles Zinc finger C2H2 type domain profile. 53 80 IPR013087 -
Lele27g0028 276 Pfam C2H2-type zinc finger 53 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0028 Lele-ChrLele27 226167 227748 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele27g0028 zf-C2H2_6 5.2e-10 CL0361