Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0020 ATGGATTCATCTGAGCCAGAAGGAAATGGGTCGGAGGGCTCTTTGCCGCCGCCACCTCCTGTCCCACCAAATGCTGTGCCAGTGATAGCAGATCAAGGACTTCCTCTTGAACCTGTCAAGAAGGTTTCCCGGGTTCCAATTGCCAGACGAGGATTAGGATCCAGAGGAAGTAAATTGTCTCTTTTAACTAACCACTTCAAAGTCAATGTTAAGAACACCGATGGCTATTTCTTCCACTACAGTGTATCATTTTCTTATGAAGATGGTCGCCCTGTAGAAGGTAAGGGTGTTGGAAGAAAAATCATCGGCAGGGTGCAGGAGACTTATGACTCTGAGTTAGCAGGGAAGGACTTCGCCTATGACGGGGAGAAGAGTTTGTTTACGGTTGGTCCTCTTCCTCGAAACAAGCTTGAATTCACTGTTGTTTTGGAGGATCTCACATCGAACAGGAATAATGGCAATTGCAGCCCTGATGCTCATGGGAGTCAAAATGAGAGTGACAAGAAGAGGATGCGACGCCCAAATCGTTCCAAAACATTTAAAGTGGAAATCAGTTATGCTGCTAAAATCCCTATGCAGGCTATCACTAATGCACTGCGTGGTCAAGATTCTGAAATTTTTCAAGAAGCGATCAGGGTGTTTGATATCATATTAAGGCAACATGCTGCCAAGCAAGGGTGTTTGCTTGTTCGTCAATCTTATTTCCACAATGATCCGAGGAGTTTTGCTGACTTTGGAGGTGGGGTTTTAGGCTGCAGAGGATTCCATTCAAGTTTCAGAACTACACAAAGTGGTTTATCACTTAACATAGATGTATCTACTACCATGATCGTACAGCCTGGGCCCGTGGTGGACTTTTTAATTGCCAACCAGAATGTGCGAGATCCTTTTACAATTGACTGGGCAAAGGCCAAAAGGACGCTTAAAAATCTGAGGATTGAGACTAGCCCAGCCAATCAAGAGTACAAGATAACTGGGCTTAGTGATCTCCCATGCAAAGAGCAGACGTTTTCTCTGAAAAACAAAAGTGGAAAGGATGGCAATGATGATTCCGAGGAAGTGACTGTTTACGATTATTTTGTTAATCATCGTAAGATAGATCTCCTTTATTCTGGGGATCTTCCGTGTATCAATGTTGGAAAACCAAAACGTCCTACTTTCTTCCCACTTGAGCTTTGCTCTTTGGTATCCCTACAACGATATACAAAATCACTGTCTACCCTTCAAAGGGCTTCCCTGGTGGAGAAATCTAGGCAGAAGCCCCAAGAGCGGATGAGAGTTTTGTCAGATGCTTTAAAAAGCAACAAGTATGACTCTGAACCCATGCTTCATAATTGCGGGGTTTCAATAAGCAATGGCTTTACCGAAGTGGAGGGTCGAGTTTTGCAGGCTCCAAGGTTGATGTTTGGTGACCGGGAGGATAACCCAAGAAATGGGAGATGGAACTTGAATAATAAGAAAATAGTGCAGCCATCAAGGATAGAAAAATGGGCTGTGGTGAACTTTTCTGCTCGTTGTAATACACCTGGGCTTGTGCGAGATCTGATTAAATGTGGAGGAACGAAAGGAGTTCTCATAGAAGAACCATTTTGTGTCTTTGAAGAAAAACCTCAGTTTAGACGTGACCCACCTGTGATGAGAGTGGAGAAAATGTTTGAAGAGATCCAGTCGAAACTTCCTGGGCACCCCAAGTTCCTTCTTTGTCTTCTTCCTGAACGGAAAAACTCTGATCTTTATGGTCCATGGAAACGGAAGAATCTTTCTGAGTTTGGAGTGGTCACTCAGTGCATAGCTCCTACAAGGGTCAACGACCAATATCTCACTAATGTTCTGATGAAGATCAATGCTAAGGTAGTCAGCTCTAGACAATGGCCTCTGATATCAAAGTATAGGGCATGTGTCCGTACCCAGTCTCCAAAGGTTGAAATGATTGATAATTTGTTCAAGCCAGTGTCTGAGAAGGAGGATGAAGGCATCATCAGGGAACTTCTGATTGACTTCTATGTAACTTCTAAGAGAAAACCACAAAATATAATAATATTCAGGGATGGGGTGAGTGACTCACAGTTCAATCAAGTATTGAACATTGAGCTCAATCAAATCATTGAGGCCTGTAAATTTCTTGATGATCAGTGGTGTCCCAAATTTGTGGTAATTGTTGCCCAGAAAAACCACCACACAAAATTTTTCCATCCTTCATCTCCTGACAACGTTCCCCCAGGAACCGTTATTGATAATAAAATATGCCATCCATGGAACTATGACTTCTATTTATGTGCACATGCAGGAATGATAGGAACTACCAGGCCTACGCATTACCATGTTTTGTTGGATGAGGTTGGTTTCTCGCCTGATGATCTGGAGGGACTTGTGCATTCGTTATCATATGTGTATCAGCGGAGTACCACTGCCATATCTGTAGGTAATTTCTTGCAACAAATGTTATTAGATGTTTGCTATGTCCTCAGTGTGGGAGATGATGGCCGGCTAAGTCTGTCCAAGATTTTGTGTCATCGGGTCATAGACATGGTTGAACAGGGAAGCCAGAGGAAGAGGCCAAACATACTGGTGACTGGTACACCAGGGACAGGAAAGACAACAATGTCCTCTGCTCTAGCAGAGGCAGTCCAACTTCGCCACATCAATATTGGAGAATTGGTCAAAGAGAAGAACTTGCATGATGGGTGGGATTGTGAGCTTGATTGTTATGTCATTAATGAAGACCTGGTCTGCGATGAGCTTGAAGACATTATGGAAGGAGGAGGGAACATTGTGGACTACCATGGCTGTGATTTCTTTCCTGAACGATGGTTCGATTGTGTGGTGGTACTTCAAACTGATAACTCTGTGTTGTATGACCGTTTGAGCAAGAGAGGGTACAAAGAGTCAAAGCTTTCCAACAATATTGAGTGCGAAATCTTTCAAGTTCTGCTTGAGGAAGCTAAAGAAAGTTACCCAGAGGACATAGTTATTGCATTAAGGAGTGATAATATTGAAGACATAAATAGAAATATTGCAACTCTAACAGAGTGGGTGAGAAACTGGCATCCCCAATCTTAG 3060 0.4314 MDSSEPEGNGSEGSLPPPPPVPPNAVPVIADQGLPLEPVKKVSRVPIARRGLGSRGSKLSLLTNHFKVNVKNTDGYFFHYSVSFSYEDGRPVEGKGVGRKIIGRVQETYDSELAGKDFAYDGEKSLFTVGPLPRNKLEFTVVLEDLTSNRNNGNCSPDAHGSQNESDKKRMRRPNRSKTFKVEISYAAKIPMQAITNALRGQDSEIFQEAIRVFDIILRQHAAKQGCLLVRQSYFHNDPRSFADFGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIVQPGPVVDFLIANQNVRDPFTIDWAKAKRTLKNLRIETSPANQEYKITGLSDLPCKEQTFSLKNKSGKDGNDDSEEVTVYDYFVNHRKIDLLYSGDLPCINVGKPKRPTFFPLELCSLVSLQRYTKSLSTLQRASLVEKSRQKPQERMRVLSDALKSNKYDSEPMLHNCGVSISNGFTEVEGRVLQAPRLMFGDREDNPRNGRWNLNNKKIVQPSRIEKWAVVNFSARCNTPGLVRDLIKCGGTKGVLIEEPFCVFEEKPQFRRDPPVMRVEKMFEEIQSKLPGHPKFLLCLLPERKNSDLYGPWKRKNLSEFGVVTQCIAPTRVNDQYLTNVLMKINAKVVSSRQWPLISKYRACVRTQSPKVEMIDNLFKPVSEKEDEGIIRELLIDFYVTSKRKPQNIIIFRDGVSDSQFNQVLNIELNQIIEACKFLDDQWCPKFVVIVAQKNHHTKFFHPSSPDNVPPGTVIDNKICHPWNYDFYLCAHAGMIGTTRPTHYHVLLDEVGFSPDDLEGLVHSLSYVYQRSTTAISVGNFLQQMLLDVCYVLSVGDDGRLSLSKILCHRVIDMVEQGSQRKRPNILVTGTPGTGKTTMSSALAEAVQLRHINIGELVKEKNLHDGWDCELDCYVINEDLVCDELEDIMEGGGNIVDYHGCDFFPERWFDCVVVLQTDNSVLYDRLSKRGYKESKLSNNIECEIFQVLLEEAKESYPEDIVIALRSDNIEDINRNIATLTEWVRNWHPQS 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0020 1019 Hamap Putative adenylate kinase. 853 1018 IPR020618 GO:0004017|GO:0005524|GO:0016887
Lele27g0020 1019 MobiDBLite consensus disorder prediction 12 26 - -
Lele27g0020 1019 Pfam Argonaute linker 1 domain 230 278 IPR014811 -
Lele27g0020 1019 MobiDBLite consensus disorder prediction 150 175 - -
Lele27g0020 1019 Pfam Piwi domain 619 808 IPR003165 GO:0003676
Lele27g0020 1019 Pfam Piwi domain 566 618 IPR003165 GO:0003676
Lele27g0020 1019 SMART DUF1785_2 228 280 IPR014811 -
Lele27g0020 1019 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 851 1014 IPR027417 -
Lele27g0020 1019 Pfam PAZ domain 284 413 IPR003100 GO:0005515
Lele27g0020 1019 SUPERFAMILY Ribonuclease H-like 549 807 IPR012337 -
Lele27g0020 1019 ProSiteProfiles PAZ domain profile. 305 397 IPR003100 GO:0005515
Lele27g0020 1019 FunFam Adenylate kinase isoenzyme 6 homolog 847 1019 - -
Lele27g0020 1019 Pfam Mid domain of argonaute 475 509 IPR032473 -
Lele27g0020 1019 MobiDBLite consensus disorder prediction 1 27 - -
Lele27g0020 1019 Pfam N-terminal domain of argonaute 59 218 IPR032474 -
Lele27g0020 1019 ProSiteProfiles Piwi domain profile. 616 807 IPR003165 GO:0003676
Lele27g0020 1019 Gene3D paz domain 274 401 - -
Lele27g0020 1019 Pfam AAA domain 855 974 - -
Lele27g0020 1019 SUPERFAMILY PAZ domain 275 437 IPR036085 GO:0005515
Lele27g0020 1019 FunFam Protein argonaute 7 275 401 - -
Lele27g0020 1019 Gene3D - 605 821 IPR036397 GO:0003676
Lele27g0020 1019 Gene3D - 845 1019 IPR027417 -
Lele27g0020 1019 CDD PAZ_argonaute_like 280 396 - -
Lele27g0020 1019 SMART Piwi_a_2 565 816 IPR003165 GO:0003676
Lele27g0020 1019 Pfam Argonaute linker 2 domain 423 469 IPR032472 -
Lele27g0020 1019 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 42 808 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0020 Lele-ChrLele27 172798 183188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0020 49 807 Eukaryotic Initiation Factors Gene Family AT5G43810 32.339 8.88e-126 405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g0020 27 172798 183188 Lele27g0020 27 172798 183188 ECH
Lele26g2111 26 24133217 24141153 Lele27g0020 27 172798 183188 hybridization