Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0003 ATGAGTTGCTTCCCATGTTGTGCATCGAAAGAAAGGATCAACCGGAAGGCATCGCAGAAGATCAGCAAGGAGTACCATGCTTCAAAATCTATAGCCTCATTTGCCAACATTTCTTTTAAAAGTGATGCCAGCAGGCAAAGGTACATAACGGAAGAAATCAAGAAGATTGGAAAAGGAAATATTACTGCTAAAATCTTCAGCTATAGAGAGCTATGTGTTGCAACCCAGAATTTTCACCATGACAACCTAATTGGCGAAGGAGGCTTTGGCAGGGTATACAAAGGATATCTCGGAAGCACGAATCAAGTTGTTGCGGTGAAGCAACTTGATAGGAATGGATTCCAAGGAAACAAAGAATTTCTTGTAGAGGTTTTGCTTTCGAGTCTCTTGAGCCACCCCAACCTCGTCAATTTGGTAGGTTATTGTGCTGATGGTAATCAGAGAATTTTAGTCTACGAGTACATGGTCAATGGTTCCTTAGAAGATCACCTTCTTGTCCTTTGGGCGCAACCACTTTTGAAAGACAAAAGAAAGTTCACTTCAATCGTTGATCCATTACTAGAAGATGATTACCCCATAAAGGGTCTGCACCAAGCTCTAGCAGTTGCAGCAATGTGTCTCCAAGAGGAAGCTTCTACTCGGCCTTTGATTAGCGACGTAGTCTCCGCTATGGAGTTCCTGGCCAAGAAGAATGTGAAAGGTGATGATGAAGAAAATGATGAACATATTTTTGACTCTTCTACTGAGGAGGATGACGACGGGGACTGCAGTATTGGAGGCTACGAATCTGATAGCATACTTGATCGCAAGAAACAAGATTAA 822 0.4234 MSCFPCCASKERINRKASQKISKEYHASKSIASFANISFKSDASRQRYITEEIKKIGKGNITAKIFSYRELCVATQNFHHDNLIGEGGFGRVYKGYLGSTNQVVAVKQLDRNGFQGNKEFLVEVLLSSLLSHPNLVNLVGYCADGNQRILVYEYMVNGSLEDHLLVLWAQPLLKDKRKFTSIVDPLLEDDYPIKGLHQALAVAAMCLQEEASTRPLISDVVSAMEFLAKKNVKGDDEENDEHIFDSSTEEDDDGDCSIGGYESDSILDRKKQD 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0003 273 ProSiteProfiles Protein kinase domain profile. 78 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g0003 273 MobiDBLite consensus disorder prediction 232 273 - -
Lele27g0003 273 PANTHER OS07G0668900 PROTEIN 165 233 - -
Lele27g0003 273 Gene3D Transferase(Phosphotransferase) domain 1 152 253 - -
Lele27g0003 273 SUPERFAMILY Protein kinase-like (PK-like) 64 166 IPR011009 -
Lele27g0003 273 Pfam Protein tyrosine and serine/threonine kinase 81 232 IPR001245 GO:0004672|GO:0006468
Lele27g0003 273 MobiDBLite consensus disorder prediction 241 258 - -
Lele27g0003 273 Gene3D Phosphorylase Kinase; domain 1 48 151 - -
Lele27g0003 273 FunFam Serine/threonine-protein kinase CDL1-like 49 154 - -
Lele27g0003 273 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0003 Lele-ChrLele27 34321 37575 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0003 165 228 Glycoside Hydrolase AT3G07070 59.375 9.84e-20 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lele27g0003 PK_Tyr_Ser-Thr 2e-16 CL0016