Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g2117 ATGGGAAACGCCAACGGCAGAGAAGATGGAGCCATTGGCAGCGATGATCGATCCGCCGCTGAATCTGGCATCCCTAGCAGTTTCGCGCCGACTTCTCAGCCTCCAGTTCGGGCTGCTTCAATCGATACCGTGGCGAATAGTCCGCCTCCTAGTCCTGGCCGATCTCGATCACCGATCTTGTTCGCTCCTCAGGCTCCTCTAGCTCCACTGCAAAGAGTTAATGGCCCTCATTTTCTCAACCAAATGTGGCAGAATGAATCCCATGGGATTGTTGATCAATGTCCTGAGCGAGGAGTCCCTGTCATGATTACATGGAGTTATGGTGGAAACAATGTGGCTGTGCAGGGATCCTGGGATAATTGGACTTCGAGGAAGCAACTGCAGAGAGCTGGCAAGGATCATTCGATTGTTATGGTCCTCCCTTCTGGCATATATCATTACAAGTTCATTGTTGATGGTGAACAGAGATATATACCTGAACTTCCTTATGTAGCTGATGAGATGGGTTGTGTCTGCAATCTTCTTGATGTTAATGATTATGTACCTGAAATTCCCGAGTGTATCAGTGAATTTGAGCCTCCACCCTCTCCAGAAGCCAGTTATGGCCAAGCGTTTCCAGCTGAAGAAGACTTTGCAAAAGAACCAATGGTGGTTCCTCAACAGCTGCATCTCACTGTCCTTGGTATGGAGAATTCAGATGTAGGTACCTCTTCAAAGCCTCAACACGTTGTGCTAAACCATGTTTTCATTGAAAAAAACTTGGCCGCCCAGTCTGTGGTTGCACTGGGCCTGACTCACAGGTTCCAGTCCAAATATGTGACCGTTGTTCTCTACAAACCACTCAAAAGGACTGTCTCTAACGTTATGCGTGTGAGCAACGAACTTGCTCCATTGGAATACTCTGCATTGTTTTTAAATTTACAGTCAGGGGAGCGCAAGTCATATCTTCTACAAGTTACCATAACAAACCATTCTTTACTCATTACTTATCATTACCGCATCACACTCAATTATTTGACATTGGTCATCTCTGCTGTCACTTACTGCATATTTTGCTACAATGCAACGACTATCACTATCATCTGA 1086 0.4586 MGNANGREDGAIGSDDRSAAESGIPSSFAPTSQPPVRAASIDTVANSPPPSPGRSRSPILFAPQAPLAPLQRVNGPHFLNQMWQNESHGIVDQCPERGVPVMITWSYGGNNVAVQGSWDNWTSRKQLQRAGKDHSIVMVLPSGIYHYKFIVDGEQRYIPELPYVADEMGCVCNLLDVNDYVPEIPECISEFEPPPSPEASYGQAFPAEEDFAKEPMVVPQQLHLTVLGMENSDVGTSSKPQHVVLNHVFIEKNLAAQSVVALGLTHRFQSKYVTVVLYKPLKRTVSNVMRVSNELAPLEYSALFLNLQSGERKSYLLQVTITNHSLLITYHYRITLNYLTLVISAVTYCIFCYNATTITII 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g2117 361 MobiDBLite consensus disorder prediction 1 60 - -
Lele26g2117 361 CDD E_set_AMPKbeta_like_N 100 177 - -
Lele26g2117 361 MobiDBLite consensus disorder prediction 20 50 - -
Lele26g2117 361 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 1 283 IPR043554 -
Lele26g2117 361 SUPERFAMILY AMPKBI-like 181 281 IPR037256 -
Lele26g2117 361 SUPERFAMILY E set domains 97 179 IPR014756 -
Lele26g2117 361 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 212 280 IPR006828 GO:0005515
Lele26g2117 361 Gene3D Immunoglobulins 92 181 IPR013783 -
Lele26g2117 361 Pfam Glycogen recognition site of AMP-activated protein kinase 99 179 IPR032640 -
Lele26g2117 361 SMART AMPKBI_2 194 281 IPR006828 GO:0005515
Lele26g2117 361 Gene3D - 187 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g2117 Lele-ChrLele26 24203845 24208929 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g2117 26 24203845 24208929 Lele01g1622 01 11265780 11266607 CCT
Lele26g2117 26 24203845 24208929 Lele02g1981 02 23449674 23452589 CCT
Lele26g2117 26 24203845 24208929 Lele03g1614 03 10539437 10540264 CCT
Lele26g2117 26 24203845 24208929 Lele04g1930 04 23800479 23801306 CCT
Lele26g2117 26 24203845 24208929 Lele27g0013 27 123736 128497 hybridization
Lele26g2117 26 24203845 24208929 Lele28g2115 28 24015727 24019868 hybridization