Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g2111 ATGAGGCGTCGAGACACGCCCTCACCCGGCCCTGCATCACACGGTATGGATTCATCTGAGCCAGAAGGAAATGGGTCGGAGGGCTCTTTGCCGCCGCCACCTCCTGTCCCACCAAATGCTGTGCCAGGGATAGCAGATCAAGTACTTCCTCTTGAACCTGTCAAGAAGGTTTTACGGGTTCCAATTGCCAGACGAGGATTAGGATCCAGAGGAAGTAAATTGTCTCTTTTAACTAACCACTTCAAAGTCAATGTTAAGAACACCGATGGCTATTTCTTCCACTACAGTGTATCATTTTCTTATGAAGATGGTCGCCCCGTAGAAGGTAAGGGTGTTGGAAGAAAAATCATTGGCAGGGTGCAGGAGACTTATGACTCTGAGTTAGCAGGGAAGGACTTCGCCTATGACGGGGAGAAGAGTTTGTTTACGGTTGGTCCTCTTCCTCGAAACAAGCTTGAATTCACTGTTGTTTTGGAGGATCTTACATCAAACAGGAATAATGGCAATTGCAGCCCTGATGCTCATGGGAGTCCGAATGAGAGTGACAAGAAGAGGATGCGACGCCCAAATCGTTCCAAAACATTTAAAGTGGAAATCAGTTATGCTGCTAAAATCCCTATGCAGGCTATCACTAATGCACTGCGTGGTCAAGATTCTGAAAATTTTCAAGAAGCGATCAGGGTGTTTGATATCATATTAAGGCAACATGCTGCCAAGCAAGGGTGTTTGCTTGTTCGTCAATCTTATTTCCACAATGATCCAAGGAGTTTTGCTGGCGTTGGAGGTGGGGTTTTAGGCTGCAGAGGATTCCATTCAAGTTTCAGAACTACACAAAGTGGTTTATCACTTAACATAGATGTATCTACTACCATGATCGTACAGCCTGGGCCCGTGGTGGACTTTTTAATTGCCAACCAGAATGTGCGAGATCCTTATTCAATTGACTGGGCAAAGGCCAAAAGGACGCTTAAAAATCTGAGGATTAAGACTAGCCCAGCCAATCAAGAGTACAAGATAACTGGGCTTAGTGATCTCCCATGCAAAGAGCAGACGTTTTCTCTGAAAAACAAAAGTGGAAAGGATGGCAATGATGATTCCGAGGAAGTGACTGTTTACGATTATTTTGTTAATCATCGTAAGATAGATCTCCGTTATTCTGGTGATCTTCCGTGTATCAATGTTGGAAAACCAAAACGTCCTACTTTCTTCCCGCTTGAGCTTTGCTCTTTGGTATCCCTACAACGATATACAAAATCACTGTCTACCCTTCAAAGGGCTTCACTGGTGGAGAAATCTAGGCAGAAGCCCCAAGAGCGGATGAGAGTTTTGTCAGATGCTTTAAAAAGCAACAAGTATGACTCTGAACCCATGCTTCATAATTGCGGGGTTTCAATAAGCAATGGCTTTACCGAAGTGGAGGGTCGCGTTTTGCAGGCTCCAAGGTTGATGTTTGGTGACCGGGAGGATAACCCAAGAAATGGGAGATGGAACTTGAATAATAAGAAAATAGTGCAGCCATCAAGGATAGAAAAATGGGCTGTGGTGAACTTTTCTGCTCGTTGTAATACACCTGGGCTTATGCGAGATCTGATTAAATGTGGAGGAATGAAAGGAGTTCTCATAGAAGAACCATTTTGTGTCTTTGAAGAAAAACCTCAGTTTAGACGTGACCCACCTGTGATGAGAGTGGAGAAAATGTTTGAAGAGATCCAGTCGAAACTTCCTGGGCCCCCCAAGTTCCTTCTTTGTCTTCTTCCTGAACGGAAAAACTCTGATCTTTATGGTCCATGGAAACGGAAGAATCTTTCTGAGTTTGGAGTGGTCACTCAGTGCATAGCTCCTACAAGGGTCAACGACCAATATCTCACTAATGTTCTGATGAAGATCAATGCTAAGCTTGGTGGTCTGAATTCAATGCTATCAATTGAACATACACCGTCAATTCCTGTTGTTTCCCAAGATCCCACCATCATTCTTGGCATGGATGTATCACATGGTTCACCGGGACAGTCTGATATCCCTTCAATTGCAGCGGTAGTCAGCTCTAGACAATGGCCTCTGATATCAAAATATAGGGCATGTGTCCGTACCCAGTCTCCAAAGGTTGAAATGATTGATAATTTGTTCAAGCCAGTGTCTGAGAAGGAGGATGAAGGCATCATCAGGGAACTTCTGATTGACTTCTATGTAACTTCTAAAAGAAAACCACAAAATATAATAATATTCAGGGATGGGGTGAGTGAATCACAGTTCAATCAAGTATTGAACATTGAACTCAATCAAATCATTGAGGCCTGTAAATTTCTTGATGATCAGTGGTGTCCCAAATTTGTGGTAATTGTTGCCCAGAAAAACCACCACACAAAATTTTTCCAGCCTTCATCTCCTGACAACGTTCCCCCAGGAACCGTTATTGATAATAAAATATGCCATCCACGGAACTATGACTTCTATTTATGTGCACATGCTGGAATGATAGGAACTACCAGGCCTACGCATTACCATGTTCTGTTGGATGAGGTTGGTTTCTCGTCTGATGATCTGGAGGGACTAGTGCATTCGTTATCATATGTGTATCAGCGGAGCACCACTGCCATATCTGTAGTTGCTCCAATATGCTATGCACACTTGGCTGCAACTCAGATGGGACAGATGATCAAATTTGAAGACAAGTCTGAGACTTGTTCGAGCCAGGGCGGGCAGTCATCTGCTGGAGCGGTTCCTGTGCCCCAGTGCCCCAAGTTGCAGGACAACGTCCGAAACTCCATGTTCTTTTGTTGA 2781 0.4408 MRRRDTPSPGPASHGMDSSEPEGNGSEGSLPPPPPVPPNAVPGIADQVLPLEPVKKVLRVPIARRGLGSRGSKLSLLTNHFKVNVKNTDGYFFHYSVSFSYEDGRPVEGKGVGRKIIGRVQETYDSELAGKDFAYDGEKSLFTVGPLPRNKLEFTVVLEDLTSNRNNGNCSPDAHGSPNESDKKRMRRPNRSKTFKVEISYAAKIPMQAITNALRGQDSENFQEAIRVFDIILRQHAAKQGCLLVRQSYFHNDPRSFAGVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIVQPGPVVDFLIANQNVRDPYSIDWAKAKRTLKNLRIKTSPANQEYKITGLSDLPCKEQTFSLKNKSGKDGNDDSEEVTVYDYFVNHRKIDLRYSGDLPCINVGKPKRPTFFPLELCSLVSLQRYTKSLSTLQRASLVEKSRQKPQERMRVLSDALKSNKYDSEPMLHNCGVSISNGFTEVEGRVLQAPRLMFGDREDNPRNGRWNLNNKKIVQPSRIEKWAVVNFSARCNTPGLMRDLIKCGGMKGVLIEEPFCVFEEKPQFRRDPPVMRVEKMFEEIQSKLPGPPKFLLCLLPERKNSDLYGPWKRKNLSEFGVVTQCIAPTRVNDQYLTNVLMKINAKLGGLNSMLSIEHTPSIPVVSQDPTIILGMDVSHGSPGQSDIPSIAAVVSSRQWPLISKYRACVRTQSPKVEMIDNLFKPVSEKEDEGIIRELLIDFYVTSKRKPQNIIIFRDGVSESQFNQVLNIELNQIIEACKFLDDQWCPKFVVIVAQKNHHTKFFQPSSPDNVPPGTVIDNKICHPRNYDFYLCAHAGMIGTTRPTHYHVLLDEVGFSSDDLEGLVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQMIKFEDKSETCSSQGGQSSAGAVPVPQCPKLQDNVRNSMFFC 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g2111 926 SMART Piwi_a_2 580 887 IPR003165 GO:0003676
Lele26g2111 926 Gene3D paz domain 289 416 - -
Lele26g2111 926 CDD Piwi_ago-like 456 881 IPR045246 -
Lele26g2111 926 FunFam Protein argonaute 3 648 926 - -
Lele26g2111 926 SUPERFAMILY PAZ domain 290 452 IPR036085 GO:0005515
Lele26g2111 926 CDD PAZ_argonaute_like 295 411 - -
Lele26g2111 926 Gene3D - 647 926 IPR036397 GO:0003676
Lele26g2111 926 ProSiteProfiles PAZ domain profile. 337 412 IPR003100 GO:0005515
Lele26g2111 926 SUPERFAMILY Ribonuclease H-like 564 885 IPR012337 -
Lele26g2111 926 Pfam PAZ domain 299 428 IPR003100 GO:0005515
Lele26g2111 926 Pfam Piwi domain 581 887 IPR003165 GO:0003676
Lele26g2111 926 MobiDBLite consensus disorder prediction 165 190 - -
Lele26g2111 926 MobiDBLite consensus disorder prediction 1 44 - -
Lele26g2111 926 Pfam Argonaute linker 2 domain 438 484 IPR032472 -
Lele26g2111 926 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 53 889 - -
Lele26g2111 926 Pfam Argonaute linker 1 domain 245 293 IPR014811 -
Lele26g2111 926 Pfam Mid domain of argonaute 490 524 IPR032473 -
Lele26g2111 926 ProSiteProfiles Piwi domain profile. 580 887 IPR003165 GO:0003676
Lele26g2111 926 SMART DUF1785_2 243 295 IPR014811 -
Lele26g2111 926 Gene3D - 476 641 - -
Lele26g2111 926 FunFam Protein argonaute 7 290 416 - -
Lele26g2111 926 Pfam N-terminal domain of argonaute 74 233 IPR032474 -
Lele26g2111 926 MobiDBLite consensus disorder prediction 27 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g2111 Lele-ChrLele26 24133217 24141153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g2111 64 926 Eukaryotic Initiation Factors Gene Family AT5G43810 35.177 1.19e-162 500
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g2111 26 24133217 24141153 Lele26g2111 26 24133217 24141153 ECH
Lele26g2111 26 24133217 24141153 Lele27g0020 27 172798 183188 hybridization