Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g2098 ATGGCTCCTGTGTCCCTTCAGCGAGATGATGGTCCATCTGACAGCATGGTATGTAGAAAGGTGGTTCTCCCCTGTCTGAAATCAATGACTTGGGTAATGGAGAACAAAAATTCAACTCCTGGGAATAGAGTAGCTGTTATCAATTTGAAGCTGCAAGATTACAGCAGGACTCCATCAGCAGAATCTGAAGTGAAGTTCCAGCTCTCAAGAGTTTCTTTGGAACCAATGTTGAGGTCTATGGCCTACATCAGTGAGCAGCTCTCAACACCAGTTAATAAGGTTGCTGTAATAAATCTCAAGCTTCAAGATACTGAGACAACTTCTGGGGAGTCTGAAGTGAAGTTTCAGGTGTCCAGGGATACATTGGATGCCATGTTACGATCAATGGCTTATATTCGTGAGCAACTCTCTCATGCTGGAGACACGCAGTCAGAGCCTGTATGGAAAAGGCAACGAAAATAA 462 0.4416 MAPVSLQRDDGPSDSMVCRKVVLPCLKSMTWVMENKNSTPGNRVAVINLKLQDYSRTPSAESEVKFQLSRVSLEPMLRSMAYISEQLSTPVNKVAVINLKLQDTETTSGESEVKFQVSRDTLDAMLRSMAYIREQLSHAGDTQSEPVWKRQRK 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g2098 153 PANTHER COMM DOMAIN-CONTAINING PROTEIN 9 89 143 IPR037360 -
Lele26g2098 153 Pfam COMM domain 85 132 IPR017920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g2098 Lele-ChrLele26 24019228 24021466 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g2045 25 27799389 27803838 Lele26g2098 26 24019228 24021466 ECH
Lele26g2098 26 24019228 24021466 Lele26g2098 26 24019228 24021466 ECH
Lele26g2098 26 24019228 24021466 Lele27g0034 27 263503 265770 hybridization
Lele26g2098 26 24019228 24021466 Lele28g2097 28 23889099 23891256 hybridization