Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g2060 ATGCGTGGACCTTCGACTCTGACCTCGACGGCATCGACCTTGACCCCTCCGATTTCGGCTCCTCCATCCCACTCAAGAAGGTCACCAACGGCGACGTTCTCGCGCCCTCTCGCGCCGGCGACTTTGATCGCCTCCGGTACCTCCTCGAGTCTGGAGTTAACGTCAATGCTCGGGACCAGTGGGATTCTGTCGCTCTCTACTATGCTTGCCTTGCTGGCCACCTCGATGCTGCTCGAGAGTGGTGCAATCTGCTCTGAGCACACATTTGACGGTGACCGTTGCCACTACGCCGCCCTTAATTTGAAAGTCAGGAAGTTGTTGAAGGCATTTGAGGCAAGACCGCCGCCTCTGGGTCCCTTGCAGGCGGCGCTGAGAGATACTTTTTTGGGTTGTTCGGCTAATAGGGCCTACTTGGAGCTTGCTGATTCTCAATCTCAAATTTCGGGTATATCATCAGCTCAGGGATTCTATTGCAACCACTTTCCTCCGGATGTGGTTTTCTATGTATCAGGAAGACCTATTGAGGCTCACAGAGTCATATTAAGTGCGAGGTCACCATTTTTCAAGAAAAAGTTTGAGAGTGATTGGAAAGAGCGCAGGGAAGTAAGATTCTCTAAGGAGAAGTTGTCCTTTCCTGCTCTCTATAGCCTCTTGCACTTCTTTTATTCTGACAGATTAGAGATTGCCGTAGATGACATGGAAGATCTTGTGAGAATCTGTAAAGTATGCAAATGCGAATCACTACAGACAATTCTGGAGAAAGAACTAATTCATCAAAAATATGCAGAGTATAAAGCGCTGAGAGATTTGGACAATTCTCAAAAGCGGTTCATTTTACAGGGTTTATCCCTTCCTGAAGAGGACAGGCTTCCTGCAGCCTTGCATCGAATCCTTTGTATTACCCTTTCAAATTCAACTCAAGAAAATGTTCTAGATGGTGGAATTGATAAATTGGCCTTTCGGGTGGGTGCAATGCAGATTGCTAACTCTATGGATGATCTTGCAGATGTTTGCATAAGAGTTGATAAAAAAGTTTTACGCTGCCATCAAGTTATTGTAGCATCAAGGTCAGAATACTTCAAAGCAAGATTGTCACGTATACAGGACTTCCATGAAGGGAAAGATGAGTCATCTGTTGATTCCCTTCCTTGTCTTGAAGAACGTGATTTGAGCAAGGAATCATTTGAGAAAATGATTGAGTACACTGATGGTCTGAAGGACATTGATCCGGAGCAGATAATTCAACATAAATGCAAGTTTCTCTAG 1266 0.455 MRGPSTLTSTASTLTPPISAPPSHSRRSPTATFSRPLAPATLIASGTSSSLELTSMLGTSGILSLSTMLALLATSMLLESGAICSEHTFDGDRCHYAALNLKVRKLLKAFEARPPPLGPLQAALRDTFLGCSANRAYLELADSQSQISGISSAQGFYCNHFPPDVVFYVSGRPIEAHRVILSARSPFFKKKFESDWKERREVRFSKEKLSFPALYSLLHFFYSDRLEIAVDDMEDLVRICKVCKCESLQTILEKELIHQKYAEYKALRDLDNSQKRFILQGLSLPEEDRLPAALHRILCITLSNSTQENVLDGGIDKLAFRVGAMQIANSMDDLADVCIRVDKKVLRCHQVIVASRSEYFKARLSRIQDFHEGKDESSVDSLPCLEERDLSKESFEKMIEYTDGLKDIDPEQIIQHKCKFL 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g2060 421 Pfam BTB/POZ domain 159 259 IPR000210 GO:0005515
Lele26g2060 421 Pfam BTB/POZ domain 333 402 IPR000210 GO:0005515
Lele26g2060 421 CDD BTB_POZ_ZBTB_KLHL-like 334 415 - -
Lele26g2060 421 SUPERFAMILY POZ domain 330 402 IPR011333 -
Lele26g2060 421 FunFam BTB/POZ domain-containing protein 157 279 - -
Lele26g2060 421 PANTHER ANKYRIN REPEAT AND BTB/POZ DOMAIN-CONTAINING PROTEIN 1 73 413 IPR044515 -
Lele26g2060 421 Gene3D Potassium Channel Kv1.1; Chain A 144 278 IPR011333 -
Lele26g2060 421 MobiDBLite consensus disorder prediction 1 32 - -
Lele26g2060 421 ProSiteProfiles BTB domain profile. 335 401 IPR000210 GO:0005515
Lele26g2060 421 ProSiteProfiles BTB domain profile. 163 230 IPR000210 GO:0005515
Lele26g2060 421 SMART BTB_4 163 260 IPR000210 GO:0005515
Lele26g2060 421 SUPERFAMILY POZ domain 152 258 IPR011333 -
Lele26g2060 421 Gene3D Potassium Channel Kv1.1; Chain A 324 415 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g2060 Lele-ChrLele26 23771561 23774166 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lele26g2060 BTB 7.4e-18 CL0033