Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1980 ATGAAAACAGCTTCTTCTCCTTCATATCAACCTCCAGGGGTTGTTGACGACGACGATCCAGTAGCAGTATCAGTGGCTATGGCGGGCGAACAGAACAATGTACTTAATGCCCTCGATGTCGCCAAGACGCAATGGTACCATTTCACCGCCATCGTCATCGCCGGCATGGGCTTCTTCACCGACGCTTACGATCTCTTCAGCATCGCCAACGTTACCAAGCTGTTGGGTCGTATCTACTACACCAAAGAAGGGGCCGAGAAGCCGGGAAGTTTGCCCCCGAACGTGTCCATAGCCGTGAACGGCGTGGCTCTCTGTGGGACGTTGGCCGGTCAGCTTTTCTTCGGGTGGCTCGGCGATAAGATGGGGAGGAAGAGAGTGTACGGAATGACTCTCGCTCTTATGGTAATCTCCTCGTTGGCTTCTGGTCTGTCTTTTGGTCAATCCCCAAAAGGTGTCATCTCCACTCTCTGCTTCTTCCGATTCTGGCTCGGCTTCGGCATCGGCGGCGACTACCCTCTCTCAGCCACCATCATGTCGGAATACGCCAACAAGAAGACTCGTGGAGCATTCATTGCCGCCGTCTTTGCTATGCAAGGGTTTGGAATTTTGGTCGGAGGAATTGTTTCTCTGATAGTCGCCACAGCGTTCGATCATGCGTATAAGGCTCCAGCATACAGTGTGAACGCAAAAGCTTCTCTTCCGCCACAAGCCGACTACGTATGGCGCATAATTCTGATGTTCGGAGCCGTGCCCGCCGCAATGACCTTCTACTCGCGAGCGAAGATGCCGGAGACGGCGAGGTACACCGCTCTGGTGGCCAAGAACGCGAAACAAGCAGCCATGGATATGTCAAAGGTGCTCCAAGTCGAACTCGAAGCCGACGAACCGCCAATATCATCATCGGAAAGAGACTACAACAGCTTCGGTTTGTTCAGTAAGGAATTCGCTCGGAGACATGGGCTTCACTTGGTCGGAACATGTACCACCTGGTTCTTACTCGACATTGCATACTACAGTTCGAATCTTTTCCAGAAAGATATTTATACGGCAGTTGGATGGCTTCCTCCGGCGAAAGAAATGAACGCCATTCATGAAGTTTACAGAGTCTCAAGAGCTCAAGTACTCATCGCACTTTGCGGCACGGTGCCGGGATACTGGTTCACGGTGGCGTTTATAGACATATTGGGACGATTCTTTATCCAACTCATGGGTTTCTTCTTCATGACCGTCTTCATGTTCGCTCTTGCAATTCCCTACGATCACTGGAGTAAGAAGGAAAACAGAGTAGGGTTCCTTGTGATGTATGCATTGACCTTCTTCTTCGCCAACTTCGGTCCAAACGCCACAACCTTCGTGGTGCCGGCCGAGATCTTCCCGGCGAGGCTGCGTTCGACTTGCCATGGGTTGTCGGCGGCTGCCGGAAAGGCCGGAGCGATAGTGGGGGCGTTTGGGTTCTTGTATGCTGCGCAGAGCAAGGATCCGAAGAAGACTGATGCAGGTTATCCAGCTGGGATTGGGATGAAGAATTCTCTGATAATGTTGGGTGTGATTAACTTTGTGGGGATGTTGTTCACTTTCTTGGTTCCAGAATCAAAGGGAAAATCGTTGGAGGAATTGAGCAGAGAAAATGAAGAAGAAGAAGGTGATCAGAATGCAACTTCCGCTTCAAGAACTGTTAATCCATTGTGA 1689 0.5104 MKTASSPSYQPPGVVDDDDPVAVSVAMAGEQNNVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFSIANVTKLLGRIYYTKEGAEKPGSLPPNVSIAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLALMVISSLASGLSFGQSPKGVISTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILVGGIVSLIVATAFDHAYKAPAYSVNAKASLPPQADYVWRIILMFGAVPAAMTFYSRAKMPETARYTALVAKNAKQAAMDMSKVLQVELEADEPPISSSERDYNSFGLFSKEFARRHGLHLVGTCTTWFLLDIAYYSSNLFQKDIYTAVGWLPPAKEMNAIHEVYRVSRAQVLIALCGTVPGYWFTVAFIDILGRFFIQLMGFFFMTVFMFALAIPYDHWSKKENRVGFLVMYALTFFFANFGPNATTFVVPAEIFPARLRSTCHGLSAAAGKAGAIVGAFGFLYAAQSKDPKKTDAGYPAGIGMKNSLIMLGVINFVGMLFTFLVPESKGKSLEELSRENEEEEGDQNATSASRTVNPL 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1980 562 SUPERFAMILY MFS general substrate transporter 36 542 IPR036259 -
Lele26g1980 562 TIGRFAM 2A0109: phosphate:H+ symporter 37 542 IPR004738 GO:0005315|GO:0006817|GO:0016020
Lele26g1980 562 ProSiteProfiles Major facilitator superfamily (MFS) profile. 50 533 IPR020846 GO:0022857
Lele26g1980 562 FunFam Inorganic phosphate transporter 1-6 46 554 - -
Lele26g1980 562 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 46 537 - -
Lele26g1980 562 Coils Coil 536 556 - -
Lele26g1980 562 MobiDBLite consensus disorder prediction 535 562 - -
Lele26g1980 562 CDD MFS_PhT 51 532 - -
Lele26g1980 562 MobiDBLite consensus disorder prediction 535 551 - -
Lele26g1980 562 Gene3D MFS general substrate transporter like domains 46 293 IPR036259 -
Lele26g1980 562 Gene3D MFS general substrate transporter like domains 296 557 IPR036259 -
Lele26g1980 562 Pfam Sugar (and other) transporter 51 541 IPR005828 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1980 Lele-ChrLele26 23219951 23222597 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1980 27 548 Inorganic Solute Cotransporters AT2G32830 78.817 0.0 865