Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1978 ATGCTACATTTGCACGACTATATAACAGATAGAAGACCAAAGATTGAGGCACTCCTTCGTCTCTCAAAATCTTCATCATGTGCGTCTGCATCTGGTTCTTATGATTCTGTTTGTGCGTGTGTTTCTGTGTTTGGTTACAAGGAATGGAGCTGCCCTGAAGCTGGTGAAATTTTGAAAAGGAATTCAGTGCCAGATTGGCCAATGCGAGGCAAGCCTCATGAAATCCTCAAGATGGAGCAGCTATGTTTCAGCCTTACCTCGGCAACCATATTCACTTCTTTACTGGTGTTCAATATTGAGACCTTCAAGTGGTCATTTGGTATTCTTTTCTCTCGCTTGGTTCGATTACCATCAATGGATGATAAGTTTGCGTTGGTTCCCTGGGCAGATATGCTGAACCATAGTTGTGATGTGGAAACCTTTCTGGATTATGATAAATCATCAAAGGGAGTTGTCTTCACCACAGATCGTCCCTACCAACCAGGTGAGCAGGTGTTTATTTCATATGGCAAGAAATCTAACGGAGAGCTTTTGCTATCTTATGGATTCGTTCCAAAGGAAGGCACTAATCCTAGTGATTCAGCTGAGTTATTATTGTCACTCAGGAAATCCGATAAATGCTACTATGAGAAGTTACAACTCTTGAAGAATAATGGACTGTCAGCATCACAGTGCTTTCCTGTAAAAGTTACTGGTTGGCCATTGGAGTTAATGGCATATGCCTATTTAGCTGTGAGCCCTCCAAGCATGAGAGGCAAATTTGAAGAGGAAAGTGGATCACTTGATTTGGACGTGACTTCTCCAAAACAACTCAACCGAAGACTCTTTTTGAAACAGCTAGCTGTGGACTTGTGCAGTAGCGAGCAAAGAATACTATTTCGCGCTCAATATATACTCCGGAGCAGACTGAGGAATATGAGGACTGGTGGATTGAGAGCTCTACAAATTTTCGATGGTTTTAGGAATCTTTTCCAATGA 978 0.4202 MLHLHDYITDRRPKIEALLRLSKSSSCASASGSYDSVCACVSVFGYKEWSCPEAGEILKRNSVPDWPMRGKPHEILKMEQLCFSLTSATIFTSLLVFNIETFKWSFGILFSRLVRLPSMDDKFALVPWADMLNHSCDVETFLDYDKSSKGVVFTTDRPYQPGEQVFISYGKKSNGELLLSYGFVPKEGTNPSDSAELLLSLRKSDKCYYEKLQLLKNNGLSASQCFPVKVTGWPLELMAYAYLAVSPPSMRGKFEEESGSLDLDVTSPKQLNRRLFLKQLAVDLCSSEQRILFRAQYILRSRLRNMRTGGLRALQIFDGFRNLFQ 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1978 325 SUPERFAMILY SET domain 94 187 IPR046341 -
Lele26g1978 325 Gene3D set domain protein methyltransferase, domain 1 72 183 - -
Lele26g1978 325 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 94 274 - -
Lele26g1978 325 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 200 309 IPR036464 -
Lele26g1978 325 Gene3D - 189 266 IPR036464 -
Lele26g1978 325 Pfam Rubisco LSMT substrate-binding 203 255 IPR015353 -
Lele26g1978 325 Pfam SET domain 97 170 IPR001214 GO:0005515
Lele26g1978 325 ProSiteProfiles SET domain profile. 17 170 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1978 Lele-ChrLele26 23199561 23205589 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele26g1978 SET 3.8e-11 No_clan