Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1971 ATGTCAGCACACAGAACTTCATATCAACCTGCTCAAAGAAGTATAGGACCCCTGAGATATAGGCCTTTGCTTCCAGATAACATTCTTCTTTCAGTAACAGTAGGAGCGAGCATGGCAACTCCACCACAAGTTTTAACATGCAAAGGTGCGGTGTGGTGGGGCGGCGGAGACAACGATGTGACGGTGGAAGATATACAAGTGGATCCTCCGAAAGCGACCGAAGTTCGAGTCAAGATGCAGTGTGCCAGCGTCTGCCACACCGATCTCCTTAGGGCCAGAGGACGTCCGATCCCTCTGTTTCCCCGAGTATTAGGCCATGAAGGAGTTGGTGTTGTCGAGAGCACTGGGGAGAGAGTAAGAGATCTGAAAGTAGGAGATGTTGTGATTCCTACATATATTGGTGAATGTCAAGAATGTGAGAACTGCATTTCAAAGGAATCCAACCTGTGCCTGAAATACCCTATTACATTAAGTGGCTTAATGCTGGATAACACATCAAGGATGTCCATAAAAGGTCAAAAGATATACCAACTCTTTAGTTGTTCCACATTTGCAGAGTACATGGTCACTGAAGCTAATTACTTAGTCAAAGTTAATCCCAACATTGACCTCGCCCATGCTAGTTTCATCTCTTGTGGGTTTTCTACTGGTTTTGGGGCTGTTTGGAAGGAAGCCAAGGTTGAGAATGGATCATCTGTGGCTGTTTTTGGCCTTGGTGGTGTTGGATTAGGGGCTATAAGCGCAGCCAACATGATGGGGGCAACAAAGATAATTGGGATTGACAAAAATGAAATGAAGAAGGCAAAAGGAAAAGCTTTTGGAATGACAGATTTCATCAATCCTGGTGCCTCTGAGAAATCAGTTTCAGAGTTGGTCAAGGAAGGAAAAGGGAAGACAATAGCAATAGGGGCAGTATCTCAAGAATTTGTGCACATCGACTTTCTCTCTCTTATACTTGGCAGAACTTTAAAAGGTTCCATTTTTGGAGGATTAAAACCCAAATCTGATCTCCCCTTCATAGTTGACAAATGCCTGAAAAAGGAGTTTCCTCTGGATGAACTTCTTACTCATGAGGTGTCACTAGGAGAGATAGATCTTTCAATACCTCGACATTATACTCCCTCAGTGACTATGGCCTCAACGCCACAAGTAATTACATGCAAAGGGGCGGTATGGTCGGGAGGCGGAGAAAACGATGTGAAGGTGGAAGACGTACAAGTGGATCCTCCCAAACCAACCGAAGTTCGCGTCAAGATGCTCTGTGCCAGTATCTGCCACACCGACCTCCTTAGGGCCGCAGGATTTCCACTCCCTTTGTTTCCTCGAGTATTAGGGCATGAAGGGGTTGGTGTTGTTGAGAGCATTGGGAAGAAAGTAACAGATCTAGAAGTAGGTGACGTTGTGATCCCAACATTTATTGGTGAATGTCAAGAATGTGAGAACTGCATTTCAAGGGAATCCAACTTTTGCCTGAAATACCCTTACACAATAAGCGGCCTAATGCTGGATAACACATCAAGGATGTCCATAAGAGGTTGA 1539 0.449 MSAHRTSYQPAQRSIGPLRYRPLLPDNILLSVTVGASMATPPQVLTCKGAVWWGGGDNDVTVEDIQVDPPKATEVRVKMQCASVCHTDLLRARGRPIPLFPRVLGHEGVGVVESTGERVRDLKVGDVVIPTYIGECQECENCISKESNLCLKYPITLSGLMLDNTSRMSIKGQKIYQLFSCSTFAEYMVTEANYLVKVNPNIDLAHASFISCGFSTGFGAVWKEAKVENGSSVAVFGLGGVGLGAISAANMMGATKIIGIDKNEMKKAKGKAFGMTDFINPGASEKSVSELVKEGKGKTIAIGAVSQEFVHIDFLSLILGRTLKGSIFGGLKPKSDLPFIVDKCLKKEFPLDELLTHEVSLGEIDLSIPRHYTPSVTMASTPQVITCKGAVWSGGGENDVKVEDVQVDPPKPTEVRVKMLCASICHTDLLRAAGFPLPLFPRVLGHEGVGVVESIGKKVTDLEVGDVVIPTFIGECQECENCISRESNFCLKYPYTISGLMLDNTSRMSIRG 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1971 512 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 445 459 IPR002328 GO:0008270|GO:0016491
Lele26g1971 512 Pfam Alcohol dehydrogenase GroES-like domain 73 198 IPR013154 -
Lele26g1971 512 Pfam Alcohol dehydrogenase GroES-like domain 413 493 IPR013154 -
Lele26g1971 512 Gene3D - 58 216 - -
Lele26g1971 512 SUPERFAMILY GroES-like 381 512 IPR011032 -
Lele26g1971 512 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 105 119 IPR002328 GO:0008270|GO:0016491
Lele26g1971 512 Gene3D - 327 365 - -
Lele26g1971 512 FunFam Alcohol dehydrogenase 6 50 230 - -
Lele26g1971 512 Gene3D - 382 512 - -
Lele26g1971 512 PANTHER ALCOHOL DEHYDROGENASE 290 365 - -
Lele26g1971 512 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 202 345 IPR036291 -
Lele26g1971 512 Gene3D - 291 326 - -
Lele26g1971 512 Pfam Zinc-binding dehydrogenase 240 305 IPR013149 -
Lele26g1971 512 Gene3D - 217 290 - -
Lele26g1971 512 FunFam S-(hydroxymethyl)glutathione dehydrogenase 217 295 - -
Lele26g1971 512 SUPERFAMILY GroES-like 40 228 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1971 Lele-ChrLele26 23134319 23140328 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1971 414 505 Monolignol Biosynthesis Gene Families AT4G37970 38.298 5.62e-12 64.7