Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1958 ATGGTCGCCTTATCAAGTTTCGATTCCCCACTTCTCGTCTACCCGTTATTGCAAATCTCTTCTGTTGCTAGCAAAGAAAGAGTCCCTGAAATGAAGATTGCTTTTCATTATTTCTTCTTTTGCCTTCACTTTTCTCAGGGCATCGACTATCCTATATGTGGAATGTTTCTTGTTCAAGAAATCCCAATCTCTCTCGTTAGCGTGATAGAAGAGAACCTAACGCAGCTGAAGATGCTCAATGCTGTTCTTTTCTCTGATATTTGCACTTATTACAGTGATCCTTGTGCTGGTACGATTGCATGCCGGCATGAGAAGAAGAAAGATGGTGCAGTTAGGCTCTATATCATGACCATAGGTGTTTTAGCACCTTATCGCCGCCTTGGTATTGGAACAAGGCTGATGAATCATGTTCTTGATTTGTGCTCCAAGGAGAACATGTCTGAGTACTTGCATGTGCGCACAGACAAAGAAGATGCCATAAACTTTTATAAGAAATTTGGGTTTGAAACGAGGGAAACGATCCCAAACTCTTATGTTCTAACTAAGCGTTTGGCTAGAAGAGGTTGCAAATACATAAAACCAACGTTTCTGGGTTCCCTGCATGAAATTACAAGTAGTGGCTTATCTTCTTCCCATATCTTCCTCCCTTGGCTTATTGGTCCCTCAACCCCTTAG 675 0.4178 MVALSSFDSPLLVYPLLQISSVASKERVPEMKIAFHYFFFCLHFSQGIDYPICGMFLVQEIPISLVSVIEENLTQLKMLNAVLFSDICTYYSDPCAGTIACRHEKKKDGAVRLYIMTIGVLAPYRRLGIGTRLMNHVLDLCSKENMSEYLHVRTDKEDAINFYKKFGFETRETIPNSYVLTKRLARRGCKYIKPTFLGSLHEITSSGLSSSHIFLPWLIGPSTP 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1958 224 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 63 185 IPR000182 GO:0016747
Lele26g1958 224 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 89 178 IPR016181 -
Lele26g1958 224 CDD NAT_SF 96 151 - -
Lele26g1958 224 Gene3D - 59 185 - -
Lele26g1958 224 PANTHER N-ALPHA-ACETYLTRANSFERASE 90 185 - -
Lele26g1958 224 Pfam Acetyltransferase (GNAT) family 95 168 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1958 Lele-ChrLele26 23044448 23048053 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lele26g1958 Acetyltransf_1 2.4e-12 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1958 26 23044448 23048053 Lele27g0165 27 1254878 1256688 hybridization
Lele26g1958 26 23044448 23048053 Lele28g1961 28 22872941 22876341 hybridization