Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1956 ATGCCTTCTACCTGCATTGTTCCTTCTGGTCACTCCATCTTCTCTCCCATACCCTTCACTTCTTCCTCCGCATTTCCCTCTTCTCAGAGATTGAAACCTCGAATTCTAACGAAAACTGCGCCTTCTTCTCTGAGATCACCCAGTAGAGGAGGACTAGTTGTAAGAGCCGCTGTTTCCATGGAGAAAGAGACGCCTGAATCTGAACGCCCACCAACTTTTCTCAGAGAATCTGATGGTCATGATCACGTCGCGTCTTCTTCTTCTTCTGTCAGGGCTCGCTTTGAGAAGATGATAAGGGATGTTCAGGACAGCGTGTGCAGTGCACTTGAAGCTGCCGATGGTGGAGCCAAGTTTAAGGAGGATGTTTGGTCCAGGCCTGGCGGTGGCGGGGGAATCAGTAGGGTTCTTCAAGACGGAGCCGTTTTTGAGAAGGCTGGGGTTAATGTGTCTGTTGTTTATGGTGTGATGCCGCCTGAGGCTTATCGTGCTGCCAAAGCTGCTCCAGCTGATCAGAAACCCGGTCCGGTTCCTTTCTTTGCGGCTGGAATCAGCTCGGTTTTACACCCAAAGAACCCATTTGCCCCAACAGTGCATTTCAATTATCGGTATTTTGAAACTGATGCTCCCACAGATGCTCCTGGAGCACCAAAACAATGGTGGTTTGGTGGTGGGACTGACTTGACTCCTTCTTACATTTTTGAGGAGGATGTCAAGCATTTCCATTCGATTCAAAAACGTGCATGTGACAAGTTTGATCCTACATTCTATCCTCGATTCAAGAAATGGTGTGATGATTACTTCTATATCAAGCATCGGAATGAGAGGAGAGGGCTTGGAGGAATATTTTTTGATGATCTGAATGACTATGATCAGGAGATGTTACTCTCCTTTGCCACCGAATGTGCCAATTCTGTCATTCCTGCTTACATACCCATAGTAGAGAAAAGGAAGGATACGGCCTTTACAGATCAGCACAAAGCATGGCAACAATTGCGGAGGGGACGATATGTTGAATTCAATTTGGTTTATGATCGGGGCACAACATTTGGACTTAAAACAGGAGGGAGGATAGAGAGTATTCTTGTTTCTCTTCCACTAACTGCTCGGTGGGAATATGATCATAAACCTGAGGAAGGAGGTGAGGAATGGAAGCTCTTAGATGCTTGCATCAACCCAAAGGAATGGATCTAG 1191 0.466 MPSTCIVPSGHSIFSPIPFTSSSAFPSSQRLKPRILTKTAPSSLRSPSRGGLVVRAAVSMEKETPESERPPTFLRESDGHDHVASSSSSVRARFEKMIRDVQDSVCSALEAADGGAKFKEDVWSRPGGGGGISRVLQDGAVFEKAGVNVSVVYGVMPPEAYRAAKAAPADQKPGPVPFFAAGISSVLHPKNPFAPTVHFNYRYFETDAPTDAPGAPKQWWFGGGTDLTPSYIFEEDVKHFHSIQKRACDKFDPTFYPRFKKWCDDYFYIKHRNERRGLGGIFFDDLNDYDQEMLLSFATECANSVIPAYIPIVEKRKDTAFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHKPEEGGEEWKLLDACINPKEWI 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1956 396 MobiDBLite consensus disorder prediction 59 88 - -
Lele26g1956 396 PRINTS Coprogen oxidase signature 180 204 IPR001260 GO:0004109|GO:0006779
Lele26g1956 396 PRINTS Coprogen oxidase signature 256 285 IPR001260 GO:0004109|GO:0006779
Lele26g1956 396 PRINTS Coprogen oxidase signature 116 132 IPR001260 GO:0004109|GO:0006779
Lele26g1956 396 PRINTS Coprogen oxidase signature 356 382 IPR001260 GO:0004109|GO:0006779
Lele26g1956 396 PRINTS Coprogen oxidase signature 219 241 IPR001260 GO:0004109|GO:0006779
Lele26g1956 396 PRINTS Coprogen oxidase signature 328 355 IPR001260 GO:0004109|GO:0006779
Lele26g1956 396 PRINTS Coprogen oxidase signature 133 154 IPR001260 GO:0004109|GO:0006779
Lele26g1956 396 FunFam oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic 55 396 - -
Lele26g1956 396 MobiDBLite consensus disorder prediction 61 82 - -
Lele26g1956 396 PIRSF Coproporphyri_ox 48 396 IPR001260 GO:0004109|GO:0006779
Lele26g1956 396 Gene3D Coproporphyrinogen III oxidase, aerobic 55 396 IPR036406 GO:0004109|GO:0006779
Lele26g1956 396 SUPERFAMILY Coproporphyrinogen III oxidase 87 396 IPR036406 GO:0004109|GO:0006779
Lele26g1956 396 ProSitePatterns Coproporphyrinogen III oxidase signature. 260 284 IPR018375 GO:0004109|GO:0006779
Lele26g1956 396 Pfam Coproporphyrinogen III oxidase 94 395 IPR001260 GO:0004109|GO:0006779
Lele26g1956 396 PANTHER COPROPORPHYRINOGEN III OXIDASE, MITOCHONDRIAL 56 396 IPR001260 GO:0004109|GO:0006779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1956 Lele-ChrLele26 23036275 23039891 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1956 26 23036275 23039891 Lele27g0166 27 1260019 1265473 hybridization
Lele26g1956 26 23036275 23039891 Lele28g1959 28 22865364 22869092 hybridization