Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1937 ATGAAGCTCCATCTTCTGCTTTCCCTTCTCCTCCTTGGCTCCACTTCAATCTTCATCTTCCTCCCACAGATCGCTCTCGCAGCCACACCTAAGCTCAGCATTCATGAAGTGAGGGCATTGAAGGAGATAGGGAAGAAGCTGGGGAAGAAGGAATGGGACTTTGGGGTAGATCCCTGCAGTGGCAAAGGCAAATGGAATGTGTCAGATGAGAGGAAAGGCTTTGCCAACTTTGTCACCTGTGATTGCTCCTTCAATCTCAATTCATCTTGCCATGTTGTAAGCATATTTTTGAAGGCTCAGAATCTTTCCGGTACTCTTCCACCAGAGTTCTCCAAGCTTCAGCATCTCAAGCAATTGGACCTTAGTCGTAACATCTTCACTGGTTCTATACCTCAGCAATGGGCTACTATGCACTTGGAAGAGCTCTCTCTTATGGGGAACAAGTTATCAGGTCCTTTTCCTAAAGTTCTTACCAATATCACAACCCTCAGAAACCTGAGTATTGAAGGGAACCTGTTTTCAGGCCCCATTCCTCCAGAGATTGGAAACTTGGTCAATTTAGAAAAAATCATTCTGTCATCAAATGGATTCACAGGAGAATTGCCGAAGGGGCTTTCAAAGTTGACCAAGTTGACTGATTTGAGGATTAGTGACAATAATTTCTCTGGGAGGATACCCGATTTCATTAGCAAATTGACATCAATTCAAAAGCTGCACATTGAGGGTTGCTCACTTGAGGGACCCATACCTTCCTGCATTTCTTCCTTGAGAAGATTAAGTGATTTGAGGATAACTGACCTGAAAGGTAGAGGCTCATCTTTTCCATCATTGGGTTATATGAAATCAATGAGGACCCTTATACTGAGGAGATGCTTGATTAAAGGAGATATCCCCTACTATATTGGGAATATGAACAAACTAAAAGTCTTAGACTTGAGTTTCAATGACTTGACTGGAAGGATGCCTACCTCTTTTGACCAGCTCGACAAAGTAGACTTCATGTATCTTACTGGTAACAAGCTAACAGGGACTATACCTAGCTGGGTTCTTGGAAGAAATGGAAACGTTGATATTTCTTACAATAACTTTAGCTGGGAGAGCTCAAGTCCAGTTGAATGTCCAAGAGGGAGTGTAAATTTAGTGGAGAGCTACTCTTCTTCTGTGAATAAACAAAAAAATGTTCACGCGTGCTTGAAAAAGAACTTCCCATGCTCTGAATCGGACAGCCAATACTACTCCTTGCACATTAACTGTGGTGGTAAGGAAGAAAATATCAATGGTACTATTTATGAAGGGGACAGAGAACAAAGAGGGGCTTCAATGTTTTACTATGGCCGGAACTGGGCTCTCAGCAGCACCGGGAACTTCATGGACAATGATATTGACTCTGATCCTTATATTGTGACCAACACTTCCAAACTTGTCAGTGTCTCTGCCCCCAGTTCAGAACTATACAAAACAGCTCGTTTGTCTCCCCTTTCTCTCACATACTATGGACTCTGTCTAATGAATGGAAACTACACTGTTAGGCTCCACTTCGCAGAGATTATGTTTATCAATGATAGATCATTTAACAGTCTTGGGAGGCGCTTATTCGACGTCTACATCCAGGGGAAGTTGGTCCTAAAGGACTTTAATATTGAGAAAGAAGCTGGTGGGACTGGAAAGCCGATTGTGAAGACATTTAATGCCACTGTCACTCAACATTCTTTGAAGATTCACTTTTACTATGCTGGAAAGGGGACGACCGGCATACCCACAAGAGGAATTTATGGACCTCTGGTATCTGCCATATCAGTAGATCCTAATTTTAAACCTCCATCACCAGGGACTGAAAAGAGAACGTTTATTATAAAGATAGTTGCTATGGTAGCTGCTCTTGTGCTTCTTGTTCTGATGCTCCTAGGTATCATGAGGTGGAAGGGCTGGTTAGGAGGCCAAGACTCCGTGTATAAAGAGCTTAGAGGAATAGACCTGCAGACAGGATTATTTACATTAAGACAAATCAAAACAGCAACCAAAAACTTTGATGCTACTAACAAAATAGGAGAAGGCGGCTTTGGTTCTGTTTACAAGGGTCTACTATCCGACGGCACTGTAATCGCGGTGAAGCAACTCTCCTCGAAATCCAAGCAGGGAAACCGCGAGTTTGTGAATGAGATAGGAATGATATCTGGACTTCAACATCCCAATCTTGTAAAGCTTTATGGATGTTGTGTGGAAGGGAACCAGTTGATACTGATATATGAGTATATGGAAAATAATTGTCTATCACGCGCACTTTTCGGAAAAGATCCAGCCTGCAAAGCAAAACTAGACTGGACAACCAGGAAGAAAATTTGCCTTGGTATAGCTCGAGCTTTGGCTTATCAGCATGAAGAGTCCAGAATAAAAATCATACATAGGGATATAAAGACTAGCAATGTGTTGCTAGATAAAGATTTTAATGCTAAGGTTTCAGATTTTGGTTTGGCAAAACTTATCGAAGATGATAATACCCATATCAGCACTCGAGTTGCTGGAACCATTGGTTATATGGCTCCTGAGTATGCAATGCGTGGCTATTTGACTGATAAAGCAGATGTTTATAGCTTTGGGGTGGTTCTATTGGAAACTATTAGTGGAAAGAGCAATACAAATTACAGACCCAATGAAGAATTTGTTTACCTTCTTGATTGGGCCAATGTTCTGCAAGAGAGAGGAAATCTACTGGATCTGGTTGATCCAGACTTAGGATCAGACTATTCAACTGAGGAGGCCATAGTTATGCTAAATGTGGCTCTTTTATGTACCAATGCATCTCCCACGCTTAGGCCAAAAATGTCGCAAGTTGTGAGCATGATAGAAGGCCAAACAGATATTCAAGATTTGCTTTCTGACCCAGGATACTCTGCAAGTAGTTCCAAACACAGGTCCATAAGGAATCACTTCTGGCAGAACCCAGATACTGATTCCTCCAGTTCATACCTTGGGACAGAAGAAAGCTTCCGTCTTATACAAGTTAACCCAGATAGATCAGATAAGTAA 3027 0.4196 MKLHLLLSLLLLGSTSIFIFLPQIALAATPKLSIHEVRALKEIGKKLGKKEWDFGVDPCSGKGKWNVSDERKGFANFVTCDCSFNLNSSCHVVSIFLKAQNLSGTLPPEFSKLQHLKQLDLSRNIFTGSIPQQWATMHLEELSLMGNKLSGPFPKVLTNITTLRNLSIEGNLFSGPIPPEIGNLVNLEKIILSSNGFTGELPKGLSKLTKLTDLRISDNNFSGRIPDFISKLTSIQKLHIEGCSLEGPIPSCISSLRRLSDLRITDLKGRGSSFPSLGYMKSMRTLILRRCLIKGDIPYYIGNMNKLKVLDLSFNDLTGRMPTSFDQLDKVDFMYLTGNKLTGTIPSWVLGRNGNVDISYNNFSWESSSPVECPRGSVNLVESYSSSVNKQKNVHACLKKNFPCSESDSQYYSLHINCGGKEENINGTIYEGDREQRGASMFYYGRNWALSSTGNFMDNDIDSDPYIVTNTSKLVSVSAPSSELYKTARLSPLSLTYYGLCLMNGNYTVRLHFAEIMFINDRSFNSLGRRLFDVYIQGKLVLKDFNIEKEAGGTGKPIVKTFNATVTQHSLKIHFYYAGKGTTGIPTRGIYGPLVSAISVDPNFKPPSPGTEKRTFIIKIVAMVAALVLLVLMLLGIMRWKGWLGGQDSVYKELRGIDLQTGLFTLRQIKTATKNFDATNKIGEGGFGSVYKGLLSDGTVIAVKQLSSKSKQGNREFVNEIGMISGLQHPNLVKLYGCCVEGNQLILIYEYMENNCLSRALFGKDPACKAKLDWTTRKKICLGIARALAYQHEESRIKIIHRDIKTSNVLLDKDFNAKVSDFGLAKLIEDDNTHISTRVAGTIGYMAPEYAMRGYLTDKADVYSFGVVLLETISGKSNTNYRPNEEFVYLLDWANVLQERGNLLDLVDPDLGSDYSTEEAIVMLNVALLCTNASPTLRPKMSQVVSMIEGQTDIQDLLSDPGYSASSSKHRSIRNHFWQNPDTDSSSSYLGTEESFRLIQVNPDRSDK 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1937 1008 SMART serkin_6 676 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1937 1008 Gene3D Phosphorylase Kinase; domain 1 647 751 - -
Lele26g1937 1008 ProSitePatterns Protein kinases ATP-binding region signature. 682 704 IPR017441 GO:0005524
Lele26g1937 1008 Gene3D Transferase(Phosphotransferase) domain 1 752 960 - -
Lele26g1937 1008 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 411 603 - -
Lele26g1937 1008 Pfam Malectin domain 413 598 IPR021720 -
Lele26g1937 1008 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 232 379 - -
Lele26g1937 1008 SUPERFAMILY L domain-like 79 347 - -
Lele26g1937 1008 SUPERFAMILY Protein kinase-like (PK-like) 660 979 IPR011009 -
Lele26g1937 1008 CDD STKc_IRAK 682 950 - -
Lele26g1937 1008 ProSiteProfiles Protein kinase domain profile. 676 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1937 1008 Gene3D Ribonuclease Inhibitor 39 161 IPR032675 -
Lele26g1937 1008 Gene3D Ribonuclease Inhibitor 162 229 IPR032675 -
Lele26g1937 1008 Pfam Leucine Rich Repeat 235 256 IPR001611 GO:0005515
Lele26g1937 1008 ProSitePatterns Serine/Threonine protein kinases active-site signature. 799 811 IPR008271 GO:0004672|GO:0006468
Lele26g1937 1008 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 646 751 - -
Lele26g1937 1008 Pfam Protein tyrosine and serine/threonine kinase 679 895 IPR001245 GO:0004672|GO:0006468
Lele26g1937 1008 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 21 984 - -
Lele26g1937 1008 FunFam Putative LRR receptor-like serine/threonine-protein kinase 752 960 - -
Lele26g1937 1008 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 38 201 - -
Lele26g1937 1008 Gene3D - 409 602 - -
Lele26g1937 1008 Gene3D Ribonuclease Inhibitor 230 397 IPR032675 -
Lele26g1937 1008 Pfam Leucine rich repeat 282 341 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1937 Lele-ChrLele26 22909456 22921653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1937 214 999 Receptor kinase-like Gene Family AT1G07650 64.179 0.0 1014
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele26g1937 PK_Tyr_Ser-Thr 9e-47 CL0016