Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1932 ATGGAAGCTGAGAATTCTGATGTGTCAAAGGCGGAAGAATTCAAACTCCTTGCAAACGAAGCATTCAATGCTCGCAAATATGGCCAAGCTATTGATTTATATACACAAGCAATTGAACTGAACAGTCGAAATGCTGTTTACTGGGCCAACCGGGCCTTTGCACATCTTAGGCTTGAGGAATATGGTAGTGCAATACAAGATGCTTCGAAGGCCATTGAAGTTGATCCTAAATATTCAAAGGGTTATTACAGACGAGGTGCTTCTCATCTTGCCATGGGGAAATTCAAGGAAGCGCTGAAGGATTTTCAGCAGGTCAAGAAAATGTGCCCAAATGATCCCGATGCAACAAAGAAATTAAAGGAATGTGAAAAGGCAGTTATGAAACTTAAATTTGAAGAAGCAATTTCTGCACCATATACTGAAAGGCGTTCAGTAGCTGAATCCTTAGATTTCCGTACCATAGGAAAGGGTCACAATTCTTTGATGCCCACCGAATTGGCCATAGCAGCAGTGACAGTAGCAGTTATGGCAGCAGGTGTGATGTTGTTCAGGACATCAGTGGCCACAATAGTAGCTGCCGTTGTGGTTGGTCTGCTGTTGCTCCTTGGGGCATATTGGTGGAGTAGCTACAATGCTGGTATAATTAGCAGGAGTTATTTACATGACCTAGATGTGGAGCCACAATATTCAGGAGCAAGAATAGAGGGGGATGTTGTTACTTTGGATTTTGTGAAAAAAATGATGGATGATTTTAAGAATCAAAAGTGCCTACATAAAAGGTATGCCTACCAAATTGTATTGCAAACAAGAGAGATGTTGTTATCCTTGCCTCCTCTTGTTGATATAAATGTTCCTGATGGCAAACATTTCACTGTTTGCGGTGATGTGCATGGTCAGTACTACGACCTCTTAAATATCTTTGAGCTTAATGGGCTTCCCTCAGAAGAGAATCCATACCTTTTTAATGGTGACTTTGTGGATAGAGGATCTTTTTCACTAGAAGTCATCCTTACTTTGTTTGCATTCAAGTGCATTTCTCCATCAGCCTTATATCTAGCTAGAGGGAATCATGAGAGCAAGAGCATGAACAAGATATATGGTTTTGAGGGCGAGGTCCGCTCGAAGTTAAGTGACACATTTGTGGAACTATTTGCAGAAGTCTTCTGCTGTTTACCTTTGGCTCATGTGATAAACGGGAAAGTTTTTGTTGTTCATGGTGGTCTTTTTAGTGTTGATGGGGTCAAACTCTCTGACATTAGAGCAATTAACCGATTTTGCGAGCCTCCGGAAGAAGGATTGATGTGTGAATTGCTATGGAGTGATCCACAACCTCTTCCTGGACGGGGCCCAAGCAAGCGTGGTGTAGGTCTTTCTTTTGGTCCAGATGTGACAAAAAGCTTTTTGCAGGAAAATAATTTAGAGTTAGTTGTCAGATCTCATGAAGTAAAGGATGAGGGTTATGAGATTGAACATGATGGTAAACTCATAACTGTATTCTCTGCTCCAAATTACTGTGACCAGATGGGTAACAAAGGCGCATTTATTCGGTTCGAAGCGCCTGATATGAAGCCAAACATTGTTACGTACTCAGCAGTGCCACACCCGGATGTGAAGCCGATGGCTTATGCAAACAACTTTCTTCGGATGTTCTCATAA 1656 0.4179 MEAENSDVSKAEEFKLLANEAFNARKYGQAIDLYTQAIELNSRNAVYWANRAFAHLRLEEYGSAIQDASKAIEVDPKYSKGYYRRGASHLAMGKFKEALKDFQQVKKMCPNDPDATKKLKECEKAVMKLKFEEAISAPYTERRSVAESLDFRTIGKGHNSLMPTELAIAAVTVAVMAAGVMLFRTSVATIVAAVVVGLLLLLGAYWWSSYNAGIISRSYLHDLDVEPQYSGARIEGDVVTLDFVKKMMDDFKNQKCLHKRYAYQIVLQTREMLLSLPPLVDINVPDGKHFTVCGDVHGQYYDLLNIFELNGLPSEENPYLFNGDFVDRGSFSLEVILTLFAFKCISPSALYLARGNHESKSMNKIYGFEGEVRSKLSDTFVELFAEVFCCLPLAHVINGKVFVVHGGLFSVDGVKLSDIRAINRFCEPPEEGLMCELLWSDPQPLPGRGPSKRGVGLSFGPDVTKSFLQENNLELVVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPDMKPNIVTYSAVPHPDVKPMAYANNFLRMFS 551
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1932 551 Pfam PPP5 TPR repeat region 220 281 IPR013235 -
Lele26g1932 551 ProSiteProfiles TPR repeat profile. 45 78 IPR019734 GO:0005515
Lele26g1932 551 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 43 544 - -
Lele26g1932 551 ProSiteProfiles TPR repeat profile. 11 44 IPR019734 GO:0005515
Lele26g1932 551 Gene3D - 208 550 IPR029052 -
Lele26g1932 551 FunFam Serine/threonine-protein phosphatase 5 208 550 - -
Lele26g1932 551 CDD MPP_PP5_C 229 544 IPR041753 -
Lele26g1932 551 FunFam Serine/threonine-protein phosphatase 5 1 138 - -
Lele26g1932 551 Pfam Tetratricopeptide repeat 17 78 - -
Lele26g1932 551 PIRSF PPPtase_5 1 551 - -
Lele26g1932 551 ProSiteProfiles TPR repeat profile. 79 112 IPR019734 GO:0005515
Lele26g1932 551 SUPERFAMILY Metallo-dependent phosphatases 238 545 IPR029052 -
Lele26g1932 551 Pfam Calcineurin-like phosphoesterase 289 483 IPR004843 GO:0016787
Lele26g1932 551 Pfam Tetratricopeptide repeat 80 112 IPR001440 GO:0005515
Lele26g1932 551 SMART tpr_5 45 78 IPR019734 GO:0005515
Lele26g1932 551 SMART tpr_5 11 44 IPR019734 GO:0005515
Lele26g1932 551 SMART tpr_5 79 112 IPR019734 GO:0005515
Lele26g1932 551 SUPERFAMILY TPR-like 6 136 IPR011990 GO:0005515
Lele26g1932 551 Gene3D Tetratricopeptide repeat domain 2 155 IPR011990 GO:0005515
Lele26g1932 551 PRINTS Serine/threonine phosphatase family signature 416 443 IPR006186 GO:0016787
Lele26g1932 551 PRINTS Serine/threonine phosphatase family signature 494 510 IPR006186 GO:0016787
Lele26g1932 551 PRINTS Serine/threonine phosphatase family signature 289 316 IPR006186 GO:0016787
Lele26g1932 551 PRINTS Serine/threonine phosphatase family signature 386 412 IPR006186 GO:0016787
Lele26g1932 551 PRINTS Serine/threonine phosphatase family signature 352 376 IPR006186 GO:0016787
Lele26g1932 551 PRINTS Serine/threonine phosphatase family signature 472 492 IPR006186 GO:0016787
Lele26g1932 551 PRINTS Serine/threonine phosphatase family signature 319 346 IPR006186 GO:0016787
Lele26g1932 551 SMART pp2a_7 257 533 IPR006186 GO:0016787
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele26g1932 Lele-ChrLele26 22879193 22885428 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1932 292 478 Calmodulin-binding Proteins AT5G63870 37.104 3.29e-40 146