Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1918 ATGGCAGAAGCACAGAATTCAGAACAAACCCACATTCCCATACCCGCATTCCCCTCCAAACCCGACAATGCCTCTGTCCCCCACATCCCCACCGGAGTTCATGACTCTCTCCGGCGCGGCCGCCGCAGCAGGGACCGACCTACCACCACCACCACCAGGAAGAAGACAAAGACGACGAAGATGAGCTCTGATGAACAGAACGCAGAAAAAGAAGAAGAAGAAGACAGGGAGGAGATAGAGAAGAAGATAGAGGCATTACAGAGGATAGTTCCAGGTGGTGAATCCTTAGGAATGGACAAGCTGTTCGATGAAACTGCAGGTTATATAATCGCATTACAGTACCAAATCAAAGGTTTGAGAGCTCTCACTAGCTTATTCGAGAGGTTAGAGAAAGACAAGTCCAAACTTGGAGGTTGA 417 0.4916 MAEAQNSEQTHIPIPAFPSKPDNASVPHIPTGVHDSLRRGRRSRDRPTTTTTRKKTKTTKMSSDEQNAEKEEEEDREEIEKKIEALQRIVPGGESLGMDKLFDETAGYIIALQYQIKGLRALTSLFERLEKDKSKLGG 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1918 138 CDD bHLH_AtIBH1_like 83 123 IPR044549 GO:0006355
Lele26g1918 138 Coils Coil 62 89 - -
Lele26g1918 138 MobiDBLite consensus disorder prediction 34 67 - -
Lele26g1918 138 MobiDBLite consensus disorder prediction 1 79 - -
Lele26g1918 138 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 40 126 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1918 Lele-ChrLele26 22787713 22788129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1918 55 122 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 38.235 8.59e-08 47.8