Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1914 ATGCTTCCTGGCTGTAAGCTAGCCTGCTCAGATGTGTTTTTCCAAGCCTTGCGTGAAAAGAATGCATTGTTTTTCTACTTTGGTGGGAATACCTTGATTCTCGTTGCAGAAGAACTTCGAGAATTAGTTGATCAACTTGTAGCATCCAATATGTCATCCAATAGCAATTTAAAAGCGGAATTGTCGAAGAAGGTTTTGGGTGTGAAATTATGGATTTTAATTGGGATTTGTGTGGGCGCATTTATAGTACTGATTCTTTGTATATTATCTATATGGGTGATGTTTCGGAGAAAGTCTAGAAGATCTCTGGACAGGTATTATTTATCCCAAATACCCAATATCTCGAAAGATATTAAGGTGGACAAAGTTGGGGTGCAGAATTCTCATGATCACCTCGAGAGCGTATTTATTCCTGTTGATGACAAATCAACTGATAAGAATTTAGATAAGATGCTCGTCCGCTTAGGCACGAGCAAATCCAATGATCATGACAATATCAGTCAGGGCAGCTCAATTTATCATCATGAGAGAGGATTTAGTTCCCTTTCAGGAGAAGAAGGAAGCTCTGGGACTGTAAGGAAGCAATCTACATTGTCATATGGAGGGCTTGTGACTGCTTCTCCATTAGTTGGCTTGCCAGAAATTTCTCATCTTGGATGGGGCCATTGGGGACAGGCAGAGAAAGAATTCAGGGTAGAAGTGGAAGCTATAGGCCATGTACGACATAAAAATCTTGTACGCCTGCTTGGATACTGCATTGAAGGAGTTCACAGGCTTTTGGTGTACGAATATGTAAATAACGGCAACTTAGAACAATGGTTACATGGGGCTTTGCACCAACATGGAATTCTTACCTGGGAGGCCCGCATGAAAGTTGTACTTGGCACTGCCAAAGCCTTTGGTGTCCTCCTCTTGGAAGCAGTCACTGGAAGGGACCCTGTAGACTATGCGCGACCTACTAATGAGGTTAATCTTGTTGAATGGCTCAAGATGATGGTGGGGACAAGAAGAGCTGATGAAGTTGTAGATCCAAGCCTTGAAGTTAAACCATTGACACGAGCGTTAAAGCGTGCCCTTCTGGTCGCACTTAGGTGTGTTGATCCTGATGCAGACAAGAGACCCAAGATGAGTCAGGATCGAAGGAATCGAAAGAGCCGCACTACCAGCATGGAAATCGATTCCATGAATGATATTCCTGGTTCATCCGAAGCAGAAAAGAAGGCCGGCGACGCCGAAAACCAAGCACCGGAAACAACTGAAGGGTAG 1266 0.4368 MLPGCKLACSDVFFQALREKNALFFYFGGNTLILVAEELRELVDQLVASNMSSNSNLKAELSKKVLGVKLWILIGICVGAFIVLILCILSIWVMFRRKSRRSLDRYYLSQIPNISKDIKVDKVGVQNSHDHLESVFIPVDDKSTDKNLDKMLVRLGTSKSNDHDNISQGSSIYHHERGFSSLSGEEGSSGTVRKQSTLSYGGLVTASPLVGLPEISHLGWGHWGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRLLVYEYVNNGNLEQWLHGALHQHGILTWEARMKVVLGTAKAFGVLLLEAVTGRDPVDYARPTNEVNLVEWLKMMVGTRRADEVVDPSLEVKPLTRALKRALLVALRCVDPDADKRPKMSQDRRNRKSRTTSMEIDSMNDIPGSSEAEKKAGDAENQAPETTEG 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1914 421 MobiDBLite consensus disorder prediction 370 390 - -
Lele26g1914 421 Gene3D Transferase(Phosphotransferase) domain 1 183 299 - -
Lele26g1914 421 MobiDBLite consensus disorder prediction 370 421 - -
Lele26g1914 421 PANTHER OS01G0323000 PROTEIN 51 223 - -
Lele26g1914 421 Pfam Protein tyrosine and serine/threonine kinase 226 302 IPR001245 GO:0004672|GO:0006468
Lele26g1914 421 Gene3D Transferase(Phosphotransferase) domain 1 300 396 - -
Lele26g1914 421 SUPERFAMILY Protein kinase-like (PK-like) 223 378 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1914 Lele-ChrLele26 22748994 22753006 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1914 72 303 Trihelix Transcription Factor Family AT1G23540 29.730 4.16e-20 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lele26g1914 PK_Tyr_Ser-Thr 6.3e-09 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1914 26 22748994 22753006 Lele27g0201 27 1543824 1548017 hybridization
Lele26g1914 26 22748994 22753006 Lele28g1925 28 22549653 22553138 hybridization