Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1903 ATGCGAATGAAGCTTACGCTAGCAAATTCCCCCAACGGCACACTTGAGGCTGCAGAATTGAATTGCCTTGAGTTAATATTTCCTTGTGCATTTGTGATCGATTTGCACTTGGAAATGAAGGAGAGACAACGTTGGACAGCTGAAGAGGATGCTTTATTACATGCTTATGTCAAACAATATGGTCCTAGGGAATGGAATATTGTGTCCCAACGCATGAACAAACCCCTTAACAGGGATGCCAAATCCTGCTTAGAAAGGTGGAAGAACTACCTCAAGCCCGGTATCCAAAAGGGGTCTCTTACTGAAGAAGAGAAATCTCTTGTTATCCGTCTTCAACAGATTTACGGCAACAAATGGAAGAAAATTGCTGCACAAGTCCCAGGTCGCACTGCTAAGAGATTGGGTAAGTGGTGGGAAGTATTTAAAGAGAAGCAGCAGAGAGAAAAAAAGGAGTTCAACAAAACAGTTGACCCAATTGAAGACACCAAATACAATCATATACTCGAGGCTTTTGCAGAAAAGCTTGTGAAAGAACGCCCTTCCCCATCCTACCTCATGGCTTCTCCTCCATCAGCTATGCATCCTTCCTGGCTTTCAAACTCTAATGGCACTTTAGCTATTAGGCCACCTTCCCCTTCTGTGACGCTAAGTCTCTCTCCCTCAACTCCATTTCGATGGTTACAACCTGAGAAAATGCCAGAGAATGCTTCTCCTGTTGTTATTGGGAATGTAAAACCTCATGGAACTATTCCAGGTTTTGGTGATAAGATGCTTGTCGTATCTGAGTTGGTTGAATGCTGTAAAGAATTGGAAGAAGGGCACCGGGCATGGTCATCGCATAGGAAGGAAGCTGCATGGAGGTTAAGGCGGGTGGAGTTGCAGTTGGAGTCAGAGAAGGCATGTCGTATGCGGGAGAAGATGGAAGAGTTTGAAGCGAAGATTGAAGCTCTTTGGGAAGAACAGATGGCAGCTTTGGATAGAATGGAATTCAAATACCGGGAGCAGCTAGCTGAACTGAGAAGAGATGGAGAAACCAAGGAGCAGAAATTGGCTGCAAAGCACTCAAGACTTAGTAAGTTTCTGGAGCAGATAGGTTGCAGACCCAAGCTTGCTGAGTCAAATTATGATGAATTGCTGGTTGAATCTGTTGATCTGGCTAGCATTAATCTGGATGACTTTAAGACAAAAATTTAA 1194 0.4397 MRMKLTLANSPNGTLEAAELNCLELIFPCAFVIDLHLEMKERQRWTAEEDALLHAYVKQYGPREWNIVSQRMNKPLNRDAKSCLERWKNYLKPGIQKGSLTEEEKSLVIRLQQIYGNKWKKIAAQVPGRTAKRLGKWWEVFKEKQQREKKEFNKTVDPIEDTKYNHILEAFAEKLVKERPSPSYLMASPPSAMHPSWLSNSNGTLAIRPPSPSVTLSLSPSTPFRWLQPEKMPENASPVVIGNVKPHGTIPGFGDKMLVVSELVECCKELEEGHRAWSSHRKEAAWRLRRVELQLESEKACRMREKMEEFEAKIEALWEEQMAALDRMEFKYREQLAELRRDGETKEQKLAAKHSRLSKFLEQIGCRPKLAESNYDELLVESVDLASINLDDFKTKI 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1903 397 Pfam Myb-like DNA-binding domain 45 107 - -
Lele26g1903 397 CDD SANT 101 142 IPR001005 -
Lele26g1903 397 Gene3D - 42 96 - -
Lele26g1903 397 ProSiteProfiles Myb-like domain profile. 37 91 IPR001005 -
Lele26g1903 397 FunFam MYB-related transcription factor 42 96 - -
Lele26g1903 397 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 39 372 - -
Lele26g1903 397 SUPERFAMILY Homeodomain-like 42 136 IPR009057 -
Lele26g1903 397 ProSiteProfiles Myb-like domain profile. 92 142 IPR001005 -
Lele26g1903 397 SMART sant 41 93 IPR001005 -
Lele26g1903 397 SMART sant 96 144 IPR001005 -
Lele26g1903 397 Gene3D - 100 162 - -
Lele26g1903 397 CDD SANT 44 91 IPR001005 -
Lele26g1903 397 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 37 95 IPR017930 -
Lele26g1903 397 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 96 146 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1903 Lele-ChrLele26 22623431 22625947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1903 39 367 MYB Transcription Factor Family AT2G37630 60.656 9.39e-144 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele26g1903 Myb_DNA-bind_6 2.3e-14 CL0123