Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1895 ATGGAAGTGATGGGTAAACTTAGAGTTAGGTTATCAGATAAGAGTGACAAAGAAGAAGAAATGATGGCTCCTGGGTTTAGATTCCACCCCACAGATGAAGAACTTGTAGGGTTTTACCTTCAGAGAAAAGTTCAGAAGAAGCCTCTTCGAATCGAACTCATCAAACAGATTGACATCTACAGATTCCATCCTTGGGATCTTCCAACAGAGAGTAATGGGGTGGAGGGCGAGAGAGAAGGATACTTTTTTTGCAGAAGAGGGAGAAAGTACAGGAACAGCAAGAGGCCTAATAGAGTGACAGTGAGTGGGTCTGGTTTCTGGAAAGCTACAGGCATTGATAAACCTATATATGGAGATGAAGGAGCTCGAAACGGCGTCGTAATTGGCCTCAAGAAGTCATTAGTGTACTATCAAGGAACTGCTGGTAAAGCCTCCAAAACTGAATGGATGATGCATGAGTTTCGTCTTCCTCCCAACAACAACGCTACTGTTGATCATCATCAACATCTTCATGAAGCTGAAGTTTGGACACTCTGCAAAATATTCAAACGAACCCCATCTCAGAAGAAGTACACACAAGCAGCAATCAAACACAGCCTAGCTCATTCAACACCTGAATCAGGAAACTTAAGATCTGACGTCATCAATGGCAACGCATGCTTCACTTTCGAAAACTCAATGATCATTCAGCAAAATGATGAAAGGAAGCAGATCAGGAAGAACATTGAAGAGGTTGAAAATGAAAGAAATTACTTATATCTGGATCAGTTAGCTCAAGCTTCACCATCAATAGTATCTTACCCTAGCTTTTGGGACCCTGGTGTGATGGAAGAGAATATATTTGCTAATGGAAACTGGGATGAGCTTCAACCTATGGTTCAAATAGCTATGGATGATCCATCCAAAGTTTATTATGATTGCACATAG 927 0.4132 MEVMGKLRVRLSDKSDKEEEMMAPGFRFHPTDEELVGFYLQRKVQKKPLRIELIKQIDIYRFHPWDLPTESNGVEGEREGYFFCRRGRKYRNSKRPNRVTVSGSGFWKATGIDKPIYGDEGARNGVVIGLKKSLVYYQGTAGKASKTEWMMHEFRLPPNNNATVDHHQHLHEAEVWTLCKIFKRTPSQKKYTQAAIKHSLAHSTPESGNLRSDVINGNACFTFENSMIIQQNDERKQIRKNIEEVENERNYLYLDQLAQASPSIVSYPSFWDPGVMEENIFANGNWDELQPMVQIAMDDPSKVYYDCT 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1895 308 Pfam No apical meristem (NAM) protein 24 156 IPR003441 GO:0003677|GO:0006355
Lele26g1895 308 Coils Coil 228 248 - -
Lele26g1895 308 Gene3D NAC domain 31 188 IPR036093 GO:0003677|GO:0006355
Lele26g1895 308 ProSiteProfiles NAC domain profile. 22 184 IPR003441 GO:0003677|GO:0006355
Lele26g1895 308 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 19 230 - -
Lele26g1895 308 SUPERFAMILY NAC domain 21 183 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1895 Lele-ChrLele26 22586668 22589739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1895 10 205 NAC Transcription Factor Family AT1G26870 53.500 9.56e-65 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele26g1895 NAM 1.2e-33 No_clan