Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1893 ATGCTCATTCTCTTCAGATTCGTACTCCGTTTCCTCTACCGATCGTTTTCCAGGGCCATGGGTTGCTTCTTCGGTTGCTTCAGGATCAGAGACGATCGCCGCCTCCCTACTTCCCAGCTTGTTGCCGATCATTCCCGCTCCAAATCTGGTGATGCTGTGGCATCTCGGAATCGTCTCTCTTCTTTATTTTCATCCGAAGAAGATTCTCCACGCGATGAGAGGGTAAAAGTAGGTTTGGGATCTCAGATGGATGACAAGGCGCTCAAGGATGAGGCCAAGTTTCTTAAAGCTTGCGGTACTTTAGCTGGGACACCTGCTGAAATCCGGAAAGCATCCGGGAAACTGAAATTATCCCCTTTTTGTAGCAAGGATTCTGAATCCGAATCTTCACGGTTTCATTCTTGGCTTCCTAATGCTCCTGTCGGGAAGCTCCAGCTGGATGCTCAACCTTTTGATCCCTCAACTCCCATAAAACCTGGTGAAGAATGGGGAAATGGCAGGGATTCTTTAGACCGCACACCAAGCAGCTGTATCTCCAATGCACAATACACTCAAAGTGACTCTGTTGACTCAACTGAAGGAAGTAGAGCAAGGAGCCTTTATTCTGTAGGTAAGACTTGTGATAATAGATCTGAAAAAAATGCAGCTTCAGTTTCTCCATGGCCAACGGTTGCAGACACTCAGAGGAAGAATAAGTCTGTACGTTTTGAATGCGATGCTGATTCTTCCTGTGGGAGTTCTTCTGAATATGGTGGAGGTCATATGAAGAAAACAGAGTCGCCAAACAATCAGAGTGCACACAAACTATCACCTTACGCGACCCCAAGGAAACTATCTGATGAAATGCAAACACCTGGAACCGTGTACCCTGCAGCATTAGAAGATTTTCCTAATTGTAAGCCTCGAGTTAGGTCCCAGTTTGTGTATTCATTTCAAGGAACAAGGGAGAATGTGTCTCAGTGCAAGGTGCTTGAGGAAGAAGAAGATTTAAACTCTGAGCAAGATTCAAGTTATCTGAAATCTTCTCATGAGCCACCTCAAAATGCAACTCCTACAACAGAGCAGTCAAAGCAACGCTCATCTGAAAATGAATCTAAAGTGGAAGAAAGTTTATCTGCTTGGTTGAAGCCTGCATCGCTGATTGAAGAAGAGAGAAGGAAGAGAATGGAGTCTGCTTATAGTCAGATTCCTCATTCTCGTAAAACTCCTGCAGATAGGCCTATCATTGGGATGGTTGCAGCTCACTGGAATGAAGAAGAGGAATCTGATATGGCTCCCCCAAAGTGGTGGGATGGCAATGGCATACCAAATTCAACGAATAAGTACAAGGAAGATCAGAAAGTGAGTTGGCATGCAACACCATTTGAAGAGAGGTTGGAGAAGGCATTGTCTGAGGATACCGTTGTGTCTCAAAGGAAGAATGTATGTGGAAAGCCCGTTGCTTTTGATGACAATGAAGAAAGTGATACAGCTCTATCTCAGATGCAAACCTCAAGTCATCCACAAACTGTGACGAGCGGCACAGGGAAACGCAAGGGGGATCGTGATGCTCTCTATTCAATAGTTTTCAATCTGAATTTTCATTCTCTTGCTGCTCGCATTCTCCTCTTTCTCTCTCTCTTCCTCTCTGTTCCCATAGCTCACACCTTGGACCTCGTGATGATGCGCTTCACATCTGAAGGTTCTAATCTCCGTTCATTGATCTCATGTTATTTTTCGCCTTTGTTAGACTTGTTATTCTGACATGTTCTGGGGATGAGTTATGAATCTTTAAGAATGGAATTATTGCAGAAGAGCAGTGATCTCACTCTCGGGTATGGTCCTACCTGTGCTGCTACAAAACGTGTGCTTCTTGTTCTGATTGAGAAGGGCATTGAGTTCGAAACTGTTCATGTTGATGTCAGCAAAGGTGAACAAAGAGATCCTGAATTCCTCAAATTACAGCCCTTTGGAGTTGTTCCCGTGATTCAAGATGGCGACTATACCTTATATGAATCCAGGGCAATAATGAGATATTATGCAGAAAAATACAAGTCTCAAGGAGTTGACTTGTTGGGGAAGACAATAGAGGAGAGAGGTCTGGTAGAACAATGGCTTGAAGTAGAGGCACATAACTTTCACCCATATGCTTACAACTTAGCTATTCATATACTGTTTGGTCCAATACTTGGGATCACACCAGATCCAAAGGTGATTGAAGAGAGTGAAGCTAAGTTGGAGAATGTTCTCAACATTTATGAAGAAAGGCTCTCAAAGAGCAAGTATTTGGCTGGTGATTTCTTCAGCCTTGCTGATATGAGCCATCTTCCTTTCATGGATTATGTGGTGAATAATATGGGGAAGGAGTATCTGATCAACAAGAGGAAGCATGTAAGTGGTTGGTGGGATGATATCAGTAACAGAGATTCATGGAAGAAGGTTCTGGAACATCACAGAGCTCCTGTGTAA 2448 0.4379 MLILFRFVLRFLYRSFSRAMGCFFGCFRIRDDRRLPTSQLVADHSRSKSGDAVASRNRLSSLFSSEEDSPRDERVKVGLGSQMDDKALKDEAKFLKACGTLAGTPAEIRKASGKLKLSPFCSKDSESESSRFHSWLPNAPVGKLQLDAQPFDPSTPIKPGEEWGNGRDSLDRTPSSCISNAQYTQSDSVDSTEGSRARSLYSVGKTCDNRSEKNAASVSPWPTVADTQRKNKSVRFECDADSSCGSSSEYGGGHMKKTESPNNQSAHKLSPYATPRKLSDEMQTPGTVYPAALEDFPNCKPRVRSQFVYSFQGTRENVSQCKVLEEEEDLNSEQDSSYLKSSHEPPQNATPTTEQSKQRSSENESKVEESLSAWLKPASLIEEERRKRMESAYSQIPHSRKTPADRPIIGMVAAHWNEEEESDMAPPKWWDGNGIPNSTNKYKEDQKVSWHATPFEERLEKALSEDTVVSQRKNVCGKPVAFDDNEESDTALSQMQTSSHPQTVTSGTGKRKGDRDALYSIVFNLNFHSLAARILLFLSLFLSVPIAHTLDLVMMRFTSEGSNLRSLISCYFSPLLDLLFXHVLGMSYESLRMELLQKSSDLTLGYGPTCAATKRVLLVLIEKGIEFETVHVDVSKGEQRDPEFLKLQPFGVVPVIQDGDYTLYESRAIMRYYAEKYKSQGVDLLGKTIEERGLVEQWLEVEAHNFHPYAYNLAIHILFGPILGITPDPKVIEESEAKLENVLNIYEERLSKSKYLAGDFFSLADMSHLPFMDYVVNNMGKEYLINKRKHVSGWWDDISNRDSWKKVLEHHRAPV 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1893 815 SFLD Glutathione Transferase (cytosolic) 607 801 IPR040079 -
Lele26g1893 815 CDD GST_N_Phi 606 676 - -
Lele26g1893 815 Pfam Glutathione S-transferase, N-terminal domain 607 674 IPR004045 -
Lele26g1893 815 MobiDBLite consensus disorder prediction 169 195 - -
Lele26g1893 815 MobiDBLite consensus disorder prediction 487 508 - -
Lele26g1893 815 Gene3D - 686 808 - -
Lele26g1893 815 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 600 681 IPR004045 -
Lele26g1893 815 MobiDBLite consensus disorder prediction 322 370 - -
Lele26g1893 815 MobiDBLite consensus disorder prediction 144 195 - -
Lele26g1893 815 SFLD Main (cytGST) 607 801 - -
Lele26g1893 815 FunFam Glutathione S-transferase F2 605 685 - -
Lele26g1893 815 CDD GST_C_Phi 690 808 IPR034347 -
Lele26g1893 815 Pfam Glutathione S-transferase, C-terminal domain 724 802 IPR004046 -
Lele26g1893 815 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 688 815 IPR010987 -
Lele26g1893 815 MobiDBLite consensus disorder prediction 247 283 - -
Lele26g1893 815 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 20 473 IPR039300 GO:0007142
Lele26g1893 815 MobiDBLite consensus disorder prediction 479 509 - -
Lele26g1893 815 Gene3D Glutaredoxin 600 685 - -
Lele26g1893 815 MobiDBLite consensus disorder prediction 335 358 - -
Lele26g1893 815 FunFam Glutathione S-transferase F2 686 808 - -
Lele26g1893 815 SUPERFAMILY GST C-terminal domain-like 683 811 IPR036282 -
Lele26g1893 815 SUPERFAMILY Thioredoxin-like 600 681 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1893 Lele-ChrLele26 22559844 22568744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1893 606 815 Glutathione S-transferase Gene Family AT2G30870 60.000 2.53e-88 276
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1893 26 22559844 22568744 Lele27g0223 27 1743656 1746812 hybridization
Lele26g1893 26 22559844 22568744 Lele28g1902 28 22374301 22377143 hybridization