Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1873 ATGAGGCTTTCTTCTTCAGAAGTTGGTCAACCGGCTCAAGAAGGGGAGACAAAATGTTTAAATTCTGAACTATGGCATGCGTGTGCTGGTCCTCTGGTGTCTCTACCACCTGTTGGAAGTCGTGTGATCTATTTTCCCCAAGGTCACAGTGAGCAGGTTGCTGCTTCAACAAACAAGGAAGTAGATGCACATATTCCCAATTACCCTAACTTGCCACCACAGCTTATCTGTCAGCTTCACAATGTGACAATGCATGCAGATGTGGAAACAGATGAAGTATATGCTCAAATGACTCTTCAACCTTTAAGTCCGCAAGAGCAAAAGGATATATATCTACTGCCTGCAGAATTTGGTACTGCCGGCAAGCAACCAACCAACTACTTCTGCAAAACATTAACAGCAAGTGATACCAGCACTCATGGAGGATTCTCTGTTCCTCGAAGAGCTGCTGAAAAAGTCTTCCCTCCTCTTGATTACTCGCAGCAGCCTCCTGTTCAGGAACTAATTGCAAGGGATCTTCATGATAATGAATGGAAATTCAGACACATTTTTCGAGGTCAACCGAAGAGGCATCTTCTAACTACAGGGTGGAGTGTTTTTGTTAGCGCTAAGAGGCTTGTTGCTGGCGATTCAGTCCTTTTTATCTGGAATGACAAAAATCAATTACTCTTGGGAATCCGGCGAGCAAATCATCCACAGACTGTCATGCCGTCTTCAGTTCTGTCAAGTGACAGCATGCATATAGGTCTTCTTGCTGCTGCAGCTCATGCAGCCGCAACAAATAGCCGCTTTACTATATTCTATAACCCAAGGGCAAGCCCATCAGAATTTGTCATTCCCTTAGCTAAGTATGTCAAAGCTGTATATCATACCCGAGTTTCTGTTGGCATGCGATTTAGGATGTTATTCGAGACAGAAGAATCAAGTGTCCGTAGGTACATGGGTACTATAACAGGCATTAGTGACTTAGATCCTGTTCGCTGGCCAAATTCACACTGGCGTTCAGTGAAGGTTGGTTGGGATGAGTCCACCGCAGGGGACAGGCAGCCTAGAGTTTCCTTGTGGGAGATTGAACCGTTGACAACATTCCCTATGTATCCATCCCCATTCCCTTTGAGGCTGAAACGCCCTTGGCCATCAGGACTACCTTCTTTTGGTCTGAAGGATGGTGACATGAACATTGGTTCTCCATTCACGTGGCTCCAAGGTGGACTCGGGGATCAAGGAATTCAATCTCTGAACTTTCATGGATTGGGGGTTGCACCATGGATGCAGCCAAGACTTGATGCTTCTATGTCAGGACTTCAGCCAGAAATATACCAAGCAATGGCTGCTGCTGCACTTCAGGAAATGAGGGCAATGGGTCCATCTAAACCTTCTTCTGAATCTCTGCTGCAGTTTCAGCAGTCTTCAAATGTTCCTGGTGCTCCTTCTTCTGGTGTCCAGAGGCAAGTGTTGCAGCAGTCTCAGTCCCAAAATGTCCTACACAACTTTCAAGAAAACCAGTTTCCTTCTCAGTCTTCGCATCTGCATCGACAGTTGCAGCGATACCATCCTTATAATGACCAGAGGCAGCAGCAGCAGCAACAACCTAACAGTTTACCTGTTCCGCAGCAGATGTCAAATGTTGTCTCTCCTTTGTCTAATTTTGCATCACCTACCCAGTTTCTCTCTCCATCCATGCCAGCCATTGCTTCAAATTGCCAGCAGCAGAGTTTTCCCGAACCTGCCAGGAACCAAATTCCCTGCTCTGATGTTTCTGCTATCCACAGTCTACTAGGATCGTTTCCCCAGGATGGAGTATCCCAGTTACTTAACATGAATGGATCCAACTCTCTGGTTTCTCCTTCTTCCTTACTGCCCAAGCAGATAACTGTTGAACCTCAGCTTCAAACTGCTGCTGCTCAGTGTGTATTACCCCAGGTGGAAAACTTGGGAACATCACACTCAAATGTATCTGAACTTCCTATTTTGCCTCCACTTCCCGGAAGAGAATATTCTGCATACCAAGGTGCTGCTGATCCTCAAACCAATCTTTTGTTTGGGGTTAATATTGATCCTGCTCTTATGTTACAAAATAGCATGTCAAACATGAGAAATGTTGGCAATGAGAATGATGCATTATTGATGCCCTTTTCAGCTTCAAACTTCGCTGGTGCTACAGGGACTGATTATCTTCCAAGCTCAGACATGACAACATCAAGTTGTGTAGATGAATCTGGTTTTTTGCAGTCTTCTGAAAATTTGGAGCAAGCAAATACATCAACTGGAACTTTTGTCAAGGTTCACAAGTCAGGGTGCTTTGGGAGGTCACTGGACATCTCTAAGTTTTGCAGCTACGATGAACTACGTAGTGAGCTTGCCCGCATGTTTGGGCTTGAAGGGCAACTAGAGAACCCTCAGAGATCAGGCTGGCAGCTTGTATTTGTTGACCGGGAGCATGACGTTCTTCTCCTTGGTGATGACCCTTGGCAGGAGTTTGTGAATAGTGTGTGGTACATCAAGATTCTGTCTCCACTTGAAGTACAACAAATGGGCAGAGAAAGTCTTGGTCCCAAGGCTTCTTCATTGAGCCACAAGCTTTCTACCACTAGCGATGCTTGCGACCACAACTATGCGAGTCGACAAGAGTTGAGAAATCCTAGCAATGGCATTGCGTCGATGGGGCCTTTAGACTACTAG 2682 0.4567 MRLSSSEVGQPAQEGETKCLNSELWHACAGPLVSLPPVGSRVIYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPQEQKDIYLLPAEFGTAGKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPVQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANHPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPSGLPSFGLKDGDMNIGSPFTWLQGGLGDQGIQSLNFHGLGVAPWMQPRLDASMSGLQPEIYQAMAAAALQEMRAMGPSKPSSESLLQFQQSSNVPGAPSSGVQRQVLQQSQSQNVLHNFQENQFPSQSSHLHRQLQRYHPYNDQRQQQQQQPNSLPVPQQMSNVVSPLSNFASPTQFLSPSMPAIASNCQQQSFPEPARNQIPCSDVSAIHSLLGSFPQDGVSQLLNMNGSNSLVSPSSLLPKQITVEPQLQTAAAQCVLPQVENLGTSHSNVSELPILPPLPGREYSAYQGAADPQTNLLFGVNIDPALMLQNSMSNMRNVGNENDALLMPFSASNFAGATGTDYLPSSDMTTSSCVDESGFLQSSENLEQANTSTGTFVKVHKSGCFGRSLDISKFCSYDELRSELARMFGLEGQLENPQRSGWQLVFVDREHDVLLLGDDPWQEFVNSVWYIKILSPLEVQQMGRESLGPKASSLSHKLSTTSDACDHNYASRQELRNPSNGIASMGPLDY 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1873 893 MobiDBLite consensus disorder prediction 452 489 - -
Lele26g1873 893 FunFam Auxin response factor 126 230 - -
Lele26g1873 893 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 846 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele26g1873 893 Gene3D - 126 229 IPR015300 -
Lele26g1873 893 Pfam B3 DNA binding domain 128 229 IPR003340 GO:0003677
Lele26g1873 893 SUPERFAMILY DNA-binding pseudobarrel domain 115 257 IPR015300 -
Lele26g1873 893 MobiDBLite consensus disorder prediction 520 540 - -
Lele26g1873 893 ProSiteProfiles B3 DNA-binding domain profile. 128 230 IPR003340 GO:0003677
Lele26g1873 893 FunFam Auxin response factor 292 364 - -
Lele26g1873 893 Pfam Auxin response factor 254 337 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele26g1873 893 SUPERFAMILY CAD & PB1 domains 748 832 - -
Lele26g1873 893 MobiDBLite consensus disorder prediction 459 489 - -
Lele26g1873 893 Gene3D - 292 364 - -
Lele26g1873 893 ProSiteProfiles PB1 domain profile. 757 841 IPR000270 GO:0005515
Lele26g1873 893 CDD B3_DNA 127 228 IPR003340 GO:0003677
Lele26g1873 893 Pfam AUX/IAA family 747 839 IPR033389 -
Lele26g1873 893 FunFam Auxin response factor 752 846 - -
Lele26g1873 893 SMART B3_2 128 230 IPR003340 GO:0003677
Lele26g1873 893 Gene3D - 753 846 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1873 Lele-ChrLele26 22373640 22382982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1873 1 470 B3 DNA Binding Superfamily AT1G30330 84.874 0.0 804
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele26g1873 AUX_IAA 6.8e-08 CL0072