Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele26g1868 | ATGAGCGCACAGGATCATTACCTTAAATATCTTCTCCGCCCGCATAAACCCTTTAGTTTCTCGAGGTTCTTACGGTCATCCCTCCTGCTCCATTCCCATAAACCCTATAACCCGTTTGTTCCCATAAACCCCATAACCCCTTTGACTAGGGTTCTCACTTCTCTCTGCGAATCCCATTTCCTCCTTTCTCTTCCTTCGATCTCCGAAGCCACCATGATTAGTACAATTTTTTTCAGAAGATCTTGTTCCTTAGTCTCAAGGCGCGCTTTCGCCGCCTCCACGTTGATCCAGTATCAGCACCATCTCACCTCATCAGTCGCCAGCTATGGTGCGGTTGCCGGTAGTGAGATTCAGCCATTCTCCAACTTGTTTGGTTCCGGTGGGTTCAAGTCAAGCGCATTTCATTCACAAGCGGGGCCGTTGAATTTCCGGGTGTCGTTGGTTTCTCGTGCCGAGTATGCTGTTGATGATTGCCCCTTCGAAGAAGGGCCCAAGGGAAACAATGATGATGGCCTTGATATAGGGAAGCTCGGTATTGCTCAGGATATTGTCTCTGCTTTGGCCCAGAGAGGTATATCGAAGCTCTTCCCCATACAGAGAGCTGTACTGGAACCTGCCATGCAAGGTCGTGATATGATTGGTCGAGCTAGGACAGGAACTGGGAAAACTCTTGCTTTTGGGATACCTATCATGGACAAGATCATTCAGTATAATGCTAAGCATGGACGAGGAAGGGATCCTCTTGCTTTGGTTTTGGCCCCGACTAGAGAACTTGCTCGGCAGGTTGAAAAGGAATTCGCTGAGTCAGCACCTAATTTGGATACAATTTGTGTTTATGGGGGAACACCCATTTCGGTCCAAATGAGGCAGCTTGACTATGGTGTCGATATTGCAGTTGGCACACCTGGTCGAATTATTGATCTTCTTAATAGAGGTGCTCTAAATTTGAAGGACATTCAGTTTGTTGTTCTTGATGAAGCAGATCAGATGCTTCAAGTTGGCTTTCAGGAAGATGTTGAAAAAATCTTGGAGAGGTTGCCTCCCAAACGCCAAACTCTTATGTTCTCAGCAACAATGCCATCTTGGATAAGGCAGATTTCTCGCAATTACTTAAATGATCCATTAACCATTGATCTTGTTGGAGATTCTGATCAGAAGTTGGCAGATGGAATTACGTTATACTCAATTGCCTCAGATATTTATGGAAAAGCAGGAATTATTGAAACTCTAGTAACTGAACATGCTAAAGGAGGAAAGTGTATTGTTTTCACCCAAACCAAACGCGATGCTGATCGACTATCAAATTCCATGTCAAGAAGCCTTAGGTGTGAGGCCTTGCATGGAGATATCTCACAAGCTCAGAGGGAAAGAACTCTTTCTGGCTTTAGAGAAGGCCATTTCAATGTTTTAGTAGCGACTGATGTTGCTTCACGTGGGCTTGACATACCGAATGTTGACCTTGTGATACATTTTGATCTTCCCAATAATTCAGAGATATTTGTTCATCGATCAGGACGGACTGGTCGAGCTGGGAGGAAAGGAATTGCTATCCTTATTTATACTCAAGATCAAACCAGAGCTGTCAAGATTATTGAGCGTGATGTTGGCTGCAGATTTTCTGAGCTACCGAGAATTACTGTTGAAGGTAAATCAGTAGGCATGTTTAATAGCATGGGTGGTGGCCGATTTAGCAATTCTGGAGGTATGCGGGATCGTAGATTTGGTGATTCAGGTTTTGGCCGTGGTTCTGGATTTGGCCGCTCCAGCTTTGGTAATTCTGATGAGAGGGGAAGGTATGGTGGACCTAAATCAAGTCAACCACGAAGTGGGTTTGGGGGATCATTTGGTAATTCTTCAGGTGAAAGCTCTGGTCGTTATGGTTCCTTTGGCTCTAGACCATCAGACAGTGGCTTTGGCAGATCTAGCGTAGATCGGTCAGGAAGCACTGGAGGATTTGGGTTTAGTCGTCCAAGTGGAGGCACTGGATTTGGATTTGGTGGTTCGGATCGTTCTGGTGGTTTTGGCTTGGGTCAATCTAGTGGATTTGGGAATGACCAGAATAATGATCAGAACAGTGGGAGAAGGCGCTTCTGA | 2094 | 0.4542 | MSAQDHYLKYLLRPHKPFSFSRFLRSSLLLHSHKPYNPFVPINPITPLTRVLTSLCESHFLLSLPSISEATMISTIFFRRSCSLVSRRAFAASTLIQYQHHLTSSVASYGAVAGSEIQPFSNLFGSGGFKSSAFHSQAGPLNFRVSLVSRAEYAVDDCPFEEGPKGNNDDGLDIGKLGIAQDIVSALAQRGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIQYNAKHGRGRDPLALVLAPTRELARQVEKEFAESAPNLDTICVYGGTPISVQMRQLDYGVDIAVGTPGRIIDLLNRGALNLKDIQFVVLDEADQMLQVGFQEDVEKILERLPPKRQTLMFSATMPSWIRQISRNYLNDPLTIDLVGDSDQKLADGITLYSIASDIYGKAGIIETLVTEHAKGGKCIVFTQTKRDADRLSNSMSRSLRCEALHGDISQAQRERTLSGFREGHFNVLVATDVASRGLDIPNVDLVIHFDLPNNSEIFVHRSGRTGRAGRKGIAILIYTQDQTRAVKIIERDVGCRFSELPRITVEGKSVGMFNSMGGGRFSNSGGMRDRRFGDSGFGRGSGFGRSSFGNSDERGRYGGPKSSQPRSGFGGSFGNSSGESSGRYGSFGSRPSDSGFGRSSVDRSGSTGGFGFSRPSGGTGFGFGGSDRSGGFGLGQSSGFGNDQNNDQNSGRRRF | 697 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele26g1868 | 697 | MobiDBLite | consensus disorder prediction | 673 | 690 | - | - | |
Lele26g1868 | 697 | CDD | DEADc | 183 | 378 | - | - | |
Lele26g1868 | 697 | FunFam | ATP-dependent RNA helicase RhlE | 165 | 380 | - | - | |
Lele26g1868 | 697 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 203 | 377 | IPR014001 | - | |
Lele26g1868 | 697 | SMART | helicmild6 | 431 | 511 | IPR001650 | - | |
Lele26g1868 | 697 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 246 | 532 | IPR027417 | - | |
Lele26g1868 | 697 | MobiDBLite | consensus disorder prediction | 556 | 697 | - | - | |
Lele26g1868 | 697 | Pfam | Helicase conserved C-terminal domain | 406 | 511 | IPR001650 | - | |
Lele26g1868 | 697 | CDD | SF2_C_DEAD | 413 | 520 | - | - | |
Lele26g1868 | 697 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 406 | 550 | IPR001650 | - | |
Lele26g1868 | 697 | Pfam | DEAD/DEAH box helicase | 196 | 363 | IPR011545 | GO:0003676|GO:0005524 | |
Lele26g1868 | 697 | Gene3D | - | 392 | 551 | IPR027417 | - | |
Lele26g1868 | 697 | SMART | ultradead3 | 191 | 394 | IPR014001 | - | |
Lele26g1868 | 697 | PANTHER | ATP-DEPENDENT RNA HELICASE RHLE-RELATED | 175 | 552 | - | - | |
Lele26g1868 | 697 | Gene3D | - | 174 | 381 | IPR027417 | - | |
Lele26g1868 | 697 | MobiDBLite | consensus disorder prediction | 607 | 655 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele26g1868 | Lele-ChrLele26 | 22337320 | 22341635 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele26g1868 | 177 | 543 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 33.602 | 4.51e-69 | 230 |