Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1857 ATGCGGAGATGGCAGCCTTCATGTAAGGAACGTCGCAGAGAGAATGGAATAGCATCGGCTGGGTTGACCCGAAATAAAATTCTTGAGTTCTCATTTCGCAGTGCAATTGCCATCGAATCACCAGCGGATAGAATAGATGAAAACGATGAGATATCGAGAACAAATCTGAAGACGTACTGCCAATGTCTTGCCGATGCTGAACTATACCTGAGGATCATTAAATGCTGTATGATTGATGTGCCTCCTTTTTATGTTCTTCTCATTGTTAAGGATTTGAATTTCCATTGCATTTATAGAAAATCAGACGAATTGCAATCAGAAGATAATCAAGTTTCTATGGAGAAAAATAAAAAAAGGAGGCTTAAAACACCAGCTCAGGTGATGGCCCTGGAAAAATTTTATGATGAGCACAAATATCCCACAGAAGAAATGAAATCAGAACTTGCTGAGGAGTTAGGCTTGACTGAAAAGCAAGTATCTGGATGGTTTTGCCACAGAAGGTTAAAAGATAAAAGATTGTTGAAAGATGAAACATGTGCTAATGGACGACACGATCGTTCAAGTGGTGTCATCCAGGATCATGTAAGTGGATTAGGGCAAGATTCATGTGGAAGCACTAAACATGGTGATTATAAGCATCTTGATCTGAAAGAGGTTGAGAGTCATGGCCTCTATGGCAATGACTTTTCTGTTGCAGATATGACTTATGAATGTAATAGACACTATAATGAAGATGATGGTGGAATGGATAACACGTCTTCTGAGAGTAGCTCATCTCTACGAGATCAGTTGTTCTCTCAAGGTCAGGATCCATATAATATGGAGCCTTCTAGATATCTGACACCTAACAGAGCTCTGCCACCTTTAGTTCCCAAAGCTGCAATTAACACTGGATATAAACCATCAGGATATTTGAAAGTGAAGGGTGAGATAGAAAATGCTGCTATAACTGCCGTCAAGAAGCAATTAGGAAGGAACTATCAGGAAGATGGTCCACTGCTTGGTGTAGAATTTGATCCAGTTCCTCCAGGAGCATTTGAGTGCCAAATGGCAGATCCAGATGATGAATCATTCCATACTGTGAATCCTGCTCTTGCCAGTCCTCCAGAAATTTCTGCCGTAAAAAGGCAACCCGCGCTTAACCCTAGGTATGACTCCAAATATAATTCCCATGATTTACATATGGAAGTTGGAGATCTTGGCTCCTTGCATGACGCTGGCTTGCTGGACAAGAAACCCCGCCGGCACAAGCAAGGTCGGACATTTCAGAGTTATACCAATCATTTACCTCGTAGGAACTCCTCCTTGGAGTTGTATGAAGATCCCACTGGAGAAGTGCCTGCTTATAAGCATGGGGAAGGGATGAGATCTGATTCTGCTTCTGACCATAGCGATCACTTTGAAGGGGACCTTGTGGTTAAGCAGACAGATTCACTTCTGCATTGCTATGATAATGTCAATTCAAAGAAAATTCGGAGGAGTGAACATGTAAAATCTAAGTCTTCAAGTTCATTAAAAAGTTCTCGCATTTCTCTTGATACTGAAACAATAGCAAAGGTCCACTATCTAGCTGAAGAGAAGTTTAGTGGAGACAAGAAGGCAAGAAAACAATATCATGATTCAGAGAGAATAAGGATTCTTCCAAATGAAACCATGATTGCACTAGTAGCTGAGATGCAACCTCAGAAGAATCGGAGGTGGGCATTCAGTTCTGTTTGGTCTGCAACAGAGATACTTTCTAGCTGTAGTGAATATGAAACCGCTGAAGCCAGTTCTTCGCTGGACTAA 1788 0.4133 MRRWQPSCKERRRENGIASAGLTRNKILEFSFRSAIAIESPADRIDENDEISRTNLKTYCQCLADAELYLRIIKCCMIDVPPFYVLLIVKDLNFHCIYRKSDELQSEDNQVSMEKNKKRRLKTPAQVMALEKFYDEHKYPTEEMKSELAEELGLTEKQVSGWFCHRRLKDKRLLKDETCANGRHDRSSGVIQDHVSGLGQDSCGSTKHGDYKHLDLKEVESHGLYGNDFSVADMTYECNRHYNEDDGGMDNTSSESSSSLRDQLFSQGQDPYNMEPSRYLTPNRALPPLVPKAAINTGYKPSGYLKVKGEIENAAITAVKKQLGRNYQEDGPLLGVEFDPVPPGAFECQMADPDDESFHTVNPALASPPEISAVKRQPALNPRYDSKYNSHDLHMEVGDLGSLHDAGLLDKKPRRHKQGRTFQSYTNHLPRRNSSLELYEDPTGEVPAYKHGEGMRSDSASDHSDHFEGDLVVKQTDSLLHCYDNVNSKKIRRSEHVKSKSSSSLKSSRISLDTETIAKVHYLAEEKFSGDKKARKQYHDSERIRILPNETMIALVAEMQPQKNRRWAFSSVWSATEILSSCSEYETAEASSSLD 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1857 595 MobiDBLite consensus disorder prediction 444 464 - -
Lele26g1857 595 Gene3D - 105 188 - -
Lele26g1857 595 SUPERFAMILY Homeodomain-like 111 176 IPR009057 -
Lele26g1857 595 Pfam Homeodomain 117 172 IPR001356 GO:0003677
Lele26g1857 595 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 100 595 - -
Lele26g1857 595 SMART HOX_1 115 177 IPR001356 GO:0003677
Lele26g1857 595 CDD homeodomain 117 172 IPR001356 GO:0003677
Lele26g1857 595 MobiDBLite consensus disorder prediction 249 272 - -
Lele26g1857 595 MobiDBLite consensus disorder prediction 242 272 - -
Lele26g1857 595 ProSiteProfiles 'Homeobox' domain profile. 113 173 IPR001356 GO:0003677
Lele26g1857 595 MobiDBLite consensus disorder prediction 415 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1857 Lele-ChrLele26 22216796 22224926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1857 97 595 Homeobox Transcription Factor Family AT4G03250 38.889 2.42e-76 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lele26g1857 Homeodomain 1.1e-17 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1857 26 22216796 22224926 Lele27g0256 27 2067448 2082324 hybridization
Lele26g1857 26 22216796 22224926 Lele28g1864 28 22058315 22063335 hybridization