Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1853 ATGCCTTGGTCGGCAACAGCAACAACAATAACTGCACAAGAACAAAACACAGTAGACCCCACTTCAATAAGACCCGCATCAGATACAATCCATTTAGATTGCCTTCCAATAGCTGTGGCTACTACAAGGAGGCTACCTTCAGATTCTGGTGGTGCCTTTACTGGCTGGGCAACCACATCCTCCGCCGGACGCGTTGCCGCCGTCCCTGATGATCTCTCTTTGGGATTCAATGCCGGTCCCTCCTCCGCCGCTGGGGGGACTCCCGCCGGAATTTGGTCCGGGGCTTCTAGGTCAGTTAACTTTGGCCATTCCGAGATGGGAATGGTGGGGCTTCGAGATGTGTTTGTGGTGGCGCCTGCTTCTTCGTACCATAACGACGTCGTCATGCCCGATCCTCACAACGCCGCCGCTACCATACACGGCGTCGGCGTTATCCCACTCCTCACGGCGGGTCCTTGTCTCGAAGGTGACACCAGCAATATGCTCAATCTCAGCAGTCATAATCGAAGCCGTAGCGGTGGAATTCAGCTCTGGCAGGATCATTACTTGAAGAAGCAAGCCCTTACCGAACACAACTTTACGACTAGCTCCGGCAATCTAGCCCACAGCGGCGGCGGCGGAGGGTTAAGCGGCTCGGCTTTGAGCTCAGGAAGTACAACATGCCAAGACTGTGGAAATCAAGCGAAGAAAGATTGTAGTCATAGAAGATGCAGAACGTGTTGCAAGAGCCGAGGTTTTGATTGCCCTACTCATGTGAAGAGCACGTGGGTTCCCGCTGCTCGTCGGAGGGAACGCCAGCTTATGGCCGCCACCGCTTCAGCTGCTGGTGGTGGTGGGTTCAATGGGGCTACATCCGTCGCCAAGAAGCCTAGACTCGTCGCCTCGCAAACCACAACCACCTCTCGTACTTCTACTTCAAACACAACCCCTCCTCGAAGCTTCGACACTAGCTCTAGCCATCAAGATGCGAGTTTCAAAGAGTCATTGCCTGGTCAAGTACGTGCGCCTGCGGTGTTCAAGTGCGTTCGTGTGACGGCGTTGGATGACGGGGATGACGAGTATGCTTATCAAGCAGTTGTGAAGATCGGTGGCCATGTGTTCAAAGGGTTTCTGTATGATCAAGGGCTAGAAAATGGAGAAGACTATCCTAATCTCTCTGGGCTGCATTTAGGAGGCGGCGGCGGGGGGAATGGCGGAAGCAGCGGCGGTGCTGGAAGAAATGGAGGTACTTCTTCATCCCCAATGCTGGATCCTTCTGATGTATACGCCGCCGCATCAGGTGGGGCTTTCCTCGCCGGTTCAACCTATGGTAGTGCCATAAATTGA 1326 0.5415 MPWSATATTITAQEQNTVDPTSIRPASDTIHLDCLPIAVATTRRLPSDSGGAFTGWATTSSAGRVAAVPDDLSLGFNAGPSSAAGGTPAGIWSGASRSVNFGHSEMGMVGLRDVFVVAPASSYHNDVVMPDPHNAAATIHGVGVIPLLTAGPCLEGDTSNMLNLSSHNRSRSGGIQLWQDHYLKKQALTEHNFTTSSGNLAHSGGGGGLSGSALSSGSTTCQDCGNQAKKDCSHRRCRTCCKSRGFDCPTHVKSTWVPAARRRERQLMAATASAAGGGGFNGATSVAKKPRLVASQTTTTSRTSTSNTTPPRSFDTSSSHQDASFKESLPGQVRAPAVFKCVRVTALDDGDDEYAYQAVVKIGGHVFKGFLYDQGLENGEDYPNLSGLHLGGGGGGNGGSSGGAGRNGGTSSSPMLDPSDVYAAASGGAFLAGSTYGSAIN 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1853 441 MobiDBLite consensus disorder prediction 387 415 - -
Lele26g1853 441 MobiDBLite consensus disorder prediction 1 24 - -
Lele26g1853 441 Pfam Domain of unknown function (DUF702) 218 377 - -
Lele26g1853 441 MobiDBLite consensus disorder prediction 290 326 - -
Lele26g1853 441 MobiDBLite consensus disorder prediction 279 329 - -
Lele26g1853 441 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 220 262 IPR006510 -
Lele26g1853 441 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 161 424 IPR007818 GO:0003700|GO:0006355
Lele26g1853 441 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 329 376 IPR006511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1853 Lele-ChrLele26 22169472 22173487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1853 38 421 C2H2 Transcription Factor Family AT5G12330 51.345 7.99e-103 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Lele26g1853 DUF702 1.3e-62 No_clan