Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1852 ATGGCTAGTCATGGCTATGGAGTCTCCCTCCCCCAGCAACACTCTCAAACACCAAATCATGAATCCTTCCAACAAAACTCCCAAAGCTTGGCCCCACTTTCCACAGGAACTAGTCATCATCATCTTTTGGGTGGCGGTGGCGACGCTGCATCCCCATTTGGAGCCCACTGTCCACCACCGCCGCCGCCTTGCCCTGACCAATACACCATCGGCGGAGGTGGCAGCAGCGGCAAAAACAGCAACAAAAAAGGCAATATGCACAAAAAGCTGAAACAACCAAGGACAGGTAAAGGAAGGCCAGTTGGTGCCAAGAACAAGCCTAAACCTCCGATTTTGATCACCAAAATGGAGGAAGAAGCTCTGAAACATGTCATCATCGAGATCTCTGCCGGCTGTGACATCGTGGCGGAGCTGATCAAGTTCGCACAAATTCATGATGTCGGACTAACTGTTCTTAGTGGGTCTGGTTCTGTAACTGACGTCACTCTCAGCCACACATTTTCCCATGCACCTTCTTTGATGACCCTCCATGGAACCTTCACCATGCTCTCTCTTTCTGGTACTTACCTAAAGTCCCCTCTTTCCTCGTCGTCCTCCTCGTCATCATTGTTTCCTGTTGCTGTCCCTTCTTGTTTGCCTGGATACTCGTCTTTCAGTATATGTCTTGCAGGAAGTCAAGGTCAAATCATTGGAGGAGTCATAGCTGGAAGAATCATTGCTGCGAGTGTTGTTGTTGTGGCGGCTGCATTTTACAAGAAACCTATGTTTCAGAGAGTCCAAAATAATGAAACTAATAGTCTTCTTGTCGATCTCTCTGATGTTTTCGTTGATCATGACGCACTCATCAGGGGTGGCACAAACGCTAGTTTCATTGGTTTGCTTGCTTCCTTCAATAATACTGGTGTCACCCCTCAAGCACCGTGA 924 0.4816 MASHGYGVSLPQQHSQTPNHESFQQNSQSLAPLSTGTSHHHLLGGGGDAASPFGAHCPPPPPPCPDQYTIGGGGSSGKNSNKKGNMHKKLKQPRTGKGRPVGAKNKPKPPILITKMEEEALKHVIIEISAGCDIVAELIKFAQIHDVGLTVLSGSGSVTDVTLSHTFSHAPSLMTLHGTFTMLSLSGTYLKSPLSSSSSSSSLFPVAVPSCLPGYSSFSICLAGSQGQIIGGVIAGRIIAASVVVVAAAFYKKPMFQRVQNNETNSLLVDLSDVFVDHDALIRGGTNASFIGLLASFNNTGVTPQAP 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1852 307 MobiDBLite consensus disorder prediction 1 109 - -
Lele26g1852 307 CDD DUF296 125 239 IPR005175 -
Lele26g1852 307 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 83 263 IPR014476 GO:0003680
Lele26g1852 307 SUPERFAMILY AF0104/ALDC/Ptd012-like 118 271 - -
Lele26g1852 307 Gene3D - 121 280 - -
Lele26g1852 307 ProSiteProfiles PPC domain profile profile. 118 272 IPR005175 -
Lele26g1852 307 MobiDBLite consensus disorder prediction 1 36 - -
Lele26g1852 307 Pfam Plants and Prokaryotes Conserved (PCC) domain 124 250 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1852 Lele-ChrLele26 22161030 22161953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1852 94 263 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 39.766 4.73e-33 121